Query= MSMg01no069_e22.b1 MSMg01no069_e22.b1 CHROMAT_FILE:
MSMg01no069_e22.b1 PHD_FILE: MSMg01no069_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:01 2005
(235 letters)
>mm_chr4_98848118_98848752
Length = 635
Score = 447 bits (231), Expect = e-130
Identities = 234/235 (99%)
Strand = Plus / Plus
Query: 1 taactgtgatcaggctaagagaaatgtgaagtctgagaacccaagaattgtgcctgtaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taactgtgatcaggctaagagaaatgtgaagtctgagaacccaagaattgtgcctgtaaa 260
Query: 61 gtcaattttggactgtatttttctttctttatgcaatctgtgagctccaaatctatgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcaattttggactgtatttttctttctttatgcaatctgtgagctccaaatctatgctc 320
Query: 121 aggcactgtttattgttttgcatttttgtactaattcagtaagagcttactaattacgtt 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 aggcactgtttattgttttgcatttttgtattaattcagtaagagcttactaattacgtt 380
Query: 181 catttttgcattgctattgatgtgtgagataggatgcatcaagtacagtctccga 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catttttgcattgctattgatgtgtgagataggatgcatcaagtacagtctccga 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_e22.g1 MSMg01no069_e22.g1 CHROMAT_FILE:
MSMg01no069_e22.g1 PHD_FILE: MSMg01no069_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:01 2005
(236 letters)
>mm_chr4_99008042_99008681
Length = 640
Score = 391 bits (202), Expect = e-113
Identities = 229/242 (94%), Gaps = 9/242 (3%)
Strand = Plus / Minus
Query: 1 aaaggctacagagagaaatcctgtctcaaaaaaaag---cccgacaatgaagaatttttt 57
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 478 aaaggctacagagagaaatcctgtctcaaaaaaaagtaa--cgacaatgaagaatttttt 421
Query: 58 atctaatatgtttaaaaatgtgctctc----ccaaatttgatggcttctgtgtatgctct 113
||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 420 atctaatatatttaaaaatgtgctctcccttccaaatttgatggcttctgtgtatgctct 361
Query: 114 gagaccccagcatgcactgcccttccggggatggacctccacgccccgtccccttcctgc 173
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 360 gagaccccagcatgcactgcccttccggggatggaccgccacaccccgtccccttcctgc 301
Query: 174 cttgcactcgtgcttattgagaaaagccaaatgactcatggcggatgcctgtgtccgtat 233
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 300 cttgcactcgtgcttattgagaaaagccaaatgactcatggcggatgcctgtgcccgtat 241
Query: 234 ct 235
||
Sbjct: 240 ct 239
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 640
Length adjustment: 9
Effective length of query: 227
Effective length of database: 631
Effective search space: 143237
Effective search space used: 143237
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
