Query= MSMg01no069_f08.b1 MSMg01no069_f08.b1 CHROMAT_FILE:
MSMg01no069_f08.b1 PHD_FILE: MSMg01no069_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:03 2005
(285 letters)
>mm_chr4_123573439_123574123
Length = 685
Score = 536 bits (277), Expect = e-157
Identities = 283/285 (99%)
Strand = Plus / Minus
Query: 1 aatcctgcgtgccctacttgtccccatccttcctacgccccacccccatcccacgagcta 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aatcctgcgtgccctacctgtccccatccttcctacgccccacccccatcccacgagcta 426
Query: 61 gcgtttcaccgttggcgctcacttaagctccttcacgggtacagcagcggttactggggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gcgtttcaccgttggcgctcacttaagctccttcacgggtacagcagcggttactggggg 366
Query: 121 gccctctcagtttctggacggaagatatgggcccgggactgaccggactgaccgaaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gccctctcagtttctggacggaagatatgggcccgggactgaccggactgaccgaaagga 306
Query: 181 gcaagaaaaactagacctgatcaaattgtgaaccaaagaaaaggcaactacatatcaata 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 305 gcaagaaaaactagacctgatcaaattgtgaaccaaagaaaaggcaacaacatatcaata 246
Query: 241 accttgtgtctgaggactaactgtagccaaattctttagaataaa 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 accttgtgtctgaggactaactgtagccaaattctttagaataaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_f08.g1 MSMg01no069_f08.g1 CHROMAT_FILE:
MSMg01no069_f08.g1 PHD_FILE: MSMg01no069_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:03 2005
(202 letters)
>mm_chr4_123394894_123395495
Length = 602
Score = 385 bits (199), Expect = e-111
Identities = 202/203 (99%), Gaps = 1/203 (0%)
Strand = Plus / Plus
Query: 1 agcctacacagagaaaccctgtctcaaa-caaaaacaaaaaggagcgggatgtcagggta 59
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 200 agcctacacagagaaaccctgtctcaaaacaaaaacaaaaaggagcgggatgtcagggta 259
Query: 60 ggaaggaggccaaggcaggagtccggcagacggtggatttgctccggagggccgggggtg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggaaggaggccaaggcaggagtccggcagacggtggatttgctccggagggccgggggtg 319
Query: 120 ggggtgacgacctagttacggggtgaagggaaggcaggaggacacgcccagacctgggcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggggtgacgacctagttacggggtgaagggaaggcaggaggacacgcccagacctgggcc 379
Query: 180 acccacagagagaggaaatgtgt 202
|||||||||||||||||||||||
Sbjct: 380 acccacagagagaggaaatgtgt 402
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 602
Length adjustment: 8
Effective length of query: 194
Effective length of database: 594
Effective search space: 115236
Effective search space used: 115236
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
