Query= MSMg01no069_n02.b1 MSMg01no069_n02.b1 CHROMAT_FILE:
MSMg01no069_n02.b1 PHD_FILE: MSMg01no069_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:40 2005
(184 letters)
>mm_chr4_11732193_11732776
Length = 584
Score = 321 bits (166), Expect = 2e-92
Identities = 178/182 (97%)
Strand = Plus / Minus
Query: 1 gatgtatagcattgtttctacactgaataattcaatataatcctcactactgggaacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gatgtatagcattgtttctacactgaataattcaatataatcctcactactgggaacatt 323
Query: 61 actcctcagtatgatatggacatgatttgagtgttctctctcccccacaaaaactgttct 120
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 322 actcctcagtatgatatggacatgatttgagtgttccccctcccccacaaaaactgttct 263
Query: 121 catgttagaagcctccttctcagatggtaaatttgctgaatactggaccgttgaaggtag 180
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 262 cgtgttagaagcctccttctcagatggtaaatttgctgaatacaggaccgttgaaggtag 203
Query: 181 gg 182
||
Sbjct: 202 gg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_n02.g1 MSMg01no069_n02.g1 CHROMAT_FILE:
MSMg01no069_n02.g1 PHD_FILE: MSMg01no069_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:40 2005
(105 letters)
>mm_chr4_11574195_11574697
Length = 503
Score = 178 bits (92), Expect = 8e-50
Identities = 101/104 (97%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 2 tcatggtaagaatggccacttgcgggagtgagtcagccttctggtatctctctggatcaa 61
|||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||
Sbjct: 202 tcatggtaagaatggccacttg-gggagtgagtcagccttctggtattt-tctggatcaa 259
Query: 62 tatcaatcctgagagcatggagagttgctttgagatggggtctc 105
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tatcaatcctgagagcatggagagttgctttgagatggggtctc 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 105
Length of database: 503
Length adjustment: 8
Effective length of query: 97
Effective length of database: 495
Effective search space: 48015
Effective search space used: 48015
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
