Query= MSMg01no072_f03.b1 MSMg01no072_f03.b1 CHROMAT_FILE:
MSMg01no072_f03.b1 PHD_FILE: MSMg01no072_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:01 2005
(348 letters)
>mm_chr4_107534644_107535391
Length = 748
Score = 625 bits (323), Expect = 0.0
Identities = 333/337 (98%), Gaps = 2/337 (0%)
Strand = Plus / Plus
Query: 5 aattccatttcctctcatcgggggcagagctcagagtgtcctcacaggcctcaggacatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aattccatttcctctcatcgggggcagagctcagagtgtcctcacaggcctcaggacatt 264
Query: 65 ttcaagcacatcagagcaaggggacagcagcgcttctaactagcttgttttcttccttct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcaagcacatcagagcaaggggacagcagcgcttctaactagcttgttttcttccttct 324
Query: 125 ctgtgtgtgtatgtgttgggggtgtgatatgtatgtgtgcatatagaggctagagatcaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgtgtgtgtatgtgttgggggtgtgatatgtatgtgtgcatatagaggctagagatcaa 384
Query: 185 ctttagaagtgttctcagtagttctccgtcttaattcttgagacagagtctctcacagaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctttagaagtgttctcagtagttctccgtcttaattcttgagacagagtctctcacagaa 444
Query: 245 cctggagctcattgcttcagataaactggttggtcagcaagcttcaggtttcctctgtct 304
||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||
Sbjct: 445 cctggagctcattgcttcagataaactggctggccagcaagcttcaggtttcct--gtct 502
Query: 305 ctacctccccagtgctgtgggtaacatgcctggctgc 341
|||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctacctccccagtgctgtgggtaacatgcctggctgc 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_f03.g1 MSMg01no072_f03.g1 CHROMAT_FILE:
MSMg01no072_f03.g1 PHD_FILE: MSMg01no072_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:01 2005
(225 letters)
>mm_chr4_107712366_107712990
Length = 625
Score = 389 bits (201), Expect = e-113
Identities = 219/225 (97%)
Strand = Plus / Minus
Query: 1 tccctcagcctgacttgtcctgatgttctttctatgagaacattcaaaatgggagcccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 425 tccctcagcctgacttgtcctgatgttctttctatgagaacattcaaaatgggagcctga 366
Query: 61 agcaagtggtgagaaagatcagttcatccatgctcttgaaggaagtggagtggccgcgtt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 agtaagtggtgagaaagatcagttcatccatgctcttgaaggaagtggagtggccgcggc 306
Query: 121 gttgctgatgggttaggcatgatctttgccgttttcttcagaggagttcacatagattcc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 305 gttgctgatgggttaggcatgagctttgccgttttcttcagaggagttcacatagattcc 246
Query: 181 tgccatcttcctggagaagcagaggaatggtggtaagcccgggtg 225
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 245 tgccatcttcctggagaagcagaggaatggtggaaagcccgggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 625
Length adjustment: 9
Effective length of query: 216
Effective length of database: 616
Effective search space: 133056
Effective search space used: 133056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
