Query= MSMg01no073_i06.b1 MSMg01no073_i06.b1 CHROMAT_FILE:
MSMg01no073_i06.b1 PHD_FILE: MSMg01no073_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:36 2005
(159 letters)
>mm_chr4_149821714_149822272
Length = 559
Score = 269 bits (139), Expect = 6e-77
Identities = 154/159 (96%)
Strand = Plus / Plus
Query: 1 gtactctactctattgctgaatcagctacatcacaagtcttcctggttccctcaaagaga 60
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 201 gtactctactctattgctgaaccagctaaatcacaagtcttcctggttccctcaaagaga 260
Query: 61 gggacaggcccgttcagttctctaggttttgtcatattgacttgcatctgacatactgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggacaggcccgttcagttctctaggttttgtcatattgacttgcatctgacatactgac 320
Query: 121 tgaggatcttttgtacctgggccatttttttctaggcca 159
|||||| |||||||||||||| || ||||||||||||||
Sbjct: 321 tgaggagcttttgtacctgggtcagttttttctaggcca 359
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 559
Length adjustment: 8
Effective length of query: 151
Effective length of database: 551
Effective search space: 83201
Effective search space used: 83201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no073_i06.g1 MSMg01no073_i06.g1 CHROMAT_FILE:
MSMg01no073_i06.g1 PHD_FILE: MSMg01no073_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:36 2005
(341 letters)
>mm_chr4_149942551_149943292
Length = 742
Score = 615 bits (318), Expect = e-180
Identities = 336/342 (98%), Gaps = 1/342 (0%)
Strand = Plus / Minus
Query: 1 tgtgagg-acaagaaagctgcgcacacttcttggtatgaagagcagacttctggtacttg 59
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgtgaggcacaagaaagcagcgcacacttcttggtatgaagagcagacttctggtacttg 483
Query: 60 acttctgcatcagtcatacaatcaacaggcagcctgagctgcacacagcacctctagagc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 acttctgcatcagtcatacaatcaacaggcagcctgagctgcacacagcacctctagagc 423
Query: 120 aagtcctcaaggagttccaatcagcccagagaagcaaataggtagagatggaccttgggc 179
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 422 aagtcctcaaggagttccaatcagcccagagaagcaaataggtacagatggaccttgggc 363
Query: 180 ctataaagaaagcagtagaggaacaaagggtggtgggtggagcttggaagaggaagcaag 239
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 362 ctataaagaaagcagtagaggaacaaagggtggtgggtggagctcggaagaggaagcaag 303
Query: 240 ctctgcttgacttaggggacttgacaaggaagagtataagcctgccaggtgagctccagc 299
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 302 ctctgcttgacttaggggacttgacaaggaagagcataagcctgccaggtgagctccagc 243
Query: 300 tgggcttccagttgcccagtaaggacataggaacattctgga 341
||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 242 tgggcttccagttgcccaggaaggacataggaacattctgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 742
Length adjustment: 9
Effective length of query: 332
Effective length of database: 733
Effective search space: 243356
Effective search space used: 243356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
