XXXXXXXXXXXXXXXXXXXXXXXXXXCTATTTCCAGAGATCCGCGGAATT
CACATTAAACTGCGAGCCCTTTTCTGCCATTCTGTGGGCATGTGGTCTTG
AGTAGCAAAGAACTCCCTTCTTAGCTGTTTTCTTGTTTTTAACTTTCTAA
AAAAGATGTATTTATTTAACATATATGGGTGCTTTTGACTGCATGTCCAT
CTGCATGCCAGAATAGGACATCGTATCTCTATATTATGAGCTGCCTTGTG
GGTGCATTGAATTGAACTCAGGACCCCTGGAAGAACACCCAGAGCTCTTA
TCTGCAGAGCCATCTTCCCAGCACCACTAGAGTTTTCTTATGGTAAGAGT
GTAAATACTAATTCCCTTAATTACTAATAATTACAATTCTGTAGTGATTG
TCTGAGATAGTTTGCCTGCTTCTGAAGTCTATAATTAAGAGTAAGTAATA
ACATTCCTAGTAGCATAGCACAAGTGAGTCTTTCTGTGTTGCCTTTTTTG
TTTTACAGCTGATACAGATAGGAGAACAGTTTANACTGGGTGAGGCATGA
TGGCCATTATGGGAAAAGGATTTTGCACTATGAAGAGAAGACATGTACAT
GGGCAGCAGTGGGCCTATAGGAATATCATCCTGTGGAAGCCCTGGATGGT
AACCTGCTCACATTCCTTTCACCACACTCTGAGGAAACAGCACATGGGCA
TCTATGTGCATTGTAGCAAGAGTC

CGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTCACTATCTGCTATTATGTCTCCCTCC
TCATTTCTAGTTTCATGTATTTGGATACACTCTCTCAGTCGTTTTGAAAG
TTTGGCTACGGGTTTATGTTGCAGGATTTTCCCTGCCCAATCACATTAGG
GCAGTGGGAGACCTGTGATTGGACAGTAAAAAGGGAGTCAGAGCTAAGAG
TCGCAGAGGGAGGGAGCATGGCAGAATAGGAGGGAGAAGTACCATGGCTG
CGGACATGTACACGTGCGGCATTTTCCAGCCACAAGTAGCTATGATTTCA
CAAGGTTCAAAATACTGGGATAAAGGGATAGAGGGATAGAGGGAACTAGT
GGCTCATGGCCAGATGCTGTAGGGGTTAGCTCCAGAGAGTTGGAGGTGGG
AGGAGCATGGGAGCATGGTCTGACACCGAGGAGAGTTGGCAGGATCACTT
CTTTTATATTTTCCACAACAGGTTTGCCTATCTTGATTTCTTAAAGAACC
AGCTTTTGGTTTTGTTGATTATTTCCATTCTTTTTTGTGTGTCTAATTGA
TTGATTTCAGCCCTTATTTTGTTTATTTCCTGCCTTTTACTCTTCTTTAT
TGTACTTGCTTCTTTTTTTCTAGACCTTTCCGACATAGCTTATACCTATT
AGTGTGAGAATTTCAAAATTTCTTCATT

Query= MSMg01no076_c18.b1 MSMg01no076_c18.b1 CHROMAT_FILE:
MSMg01no076_c18.b1 PHD_FILE: MSMg01no076_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:03 2005
         (570 letters)



>mm_chr4_95702916_95703885
          Length = 970

 Score =  998 bits (516), Expect = 0.0
 Identities = 553/567 (97%), Gaps = 5/567 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcacattaaactgcgagcccttttctgcc-attctgtgggcatgtggtcttgagta 65
           ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 206 gaattcacattaaactgtgagcccttttctgccaattctgtgggcatgtggtcttgagta 265

                                                                       
Query: 66  gcaaagaactcccttcttagctgttttcttgtttttaactttctaaaaaagatgtattta 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gcaaagaactcccttcttagctgttttcttgtttttaactttctaaaaaagatgtattta 325

                                                                       
Query: 126 tttaacatatatgggtgcttttgactgcatgtccatctgcatgccagaataggacatcgt 185
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 326 tttaacatatatgggtgcttttgactgcatgtccatctgcatgccagaagaggacatcgt 385

                                                                       
Query: 186 atct--ctatattatgagctgccttgtgggtgcattgaattgaactcaggacccctggaa 243
           ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atctcactatattatgagctgccttgtgggtgcattgaattgaactcaggacccctggaa 445

                                                                       
Query: 244 gaacacccagagctcttatctgcagagccatcttcccagcaccactagagttttcttatg 303
           |||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||
Sbjct: 446 gaacacccagagctcttatctgcagaaccatcttcccagcaccact--agttttcttatg 503

                                                                       
Query: 304 gtaagagtgtaaatactaattcccttaattactaataattacaattctgtagtgattgtc 363
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtaagagtgtagatactaattcccttaattactaataattacaattctgtagtgattgtc 563

                                                                       
Query: 364 tgagatagtttgcctgcttctgaagtctataattaagagtaagtaataacattcctagta 423
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgagatagtttgcctgctcctgaagtctataattaagagtaagtaataacattcctagta 623

                                                                       
Query: 424 gcatagcacaagtgagtctttctgtgttgccttttttgttttacagctgatacagatagg 483
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gcatagcataagtgagtctttctgtgttgccttttttgttttacagctgatacagatagg 683

                                                                       
Query: 484 agaacagtttanactgggtgaggcatgatggccattatgggaaaaggattttgcactatg 543
           ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 684 agaacagtttaaactgggtgaggcatgatggccacgatgggaaaaggattttgcactatg 743

                                      
Query: 544 aagagaagacatgtacatgggcagcag 570
           |||||||||||||||||||||||||||
Sbjct: 744 aagagaagacatgtacatgggcagcag 770


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space:   537600
Effective search space used:   537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)