Query= MSMg01no076_h23.b1 MSMg01no076_h23.b1 CHROMAT_FILE:
MSMg01no076_h23.b1 PHD_FILE: MSMg01no076_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:29 2005
(400 letters)
>mm_chr4_42902479_42903278
Length = 800
Score = 704 bits (364), Expect = 0.0
Identities = 391/400 (97%)
Strand = Plus / Plus
Query: 1 tgattctatcatcctcattatccaggaaatgttagggatattaatgtaatcttaaaatta 60
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 201 tgattctatcatcctcattatccaggaaatgttaaggatattaatggaatcttaaaatta 260
Query: 61 aactttgcatactttagatttcagaaacacttggagttttacagcctaatgcagcggtca 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 aactttgcatactttagatttcagaaacgcttggagttttacagcctaatgcagcggtca 320
Query: 121 gtgggtttttttctgtgaagaacaagataataaataatgtaggctttgtagatagtacgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgggtttttttctgtgaagaacaagataataaataatgtaggctttgtagatagtacgc 380
Query: 181 taggaagggccagacagtaaattatttaggttttgcaaatcccatgctaggaatcctcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggaagggccagacagtaaattatttaggttttgcaaatcccatgctaggaatcctcct 440
Query: 241 ccggtctccttcccagaaggcagtgccgcaaggtgagtaaggcgctgtctgagagttctc 300
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 441 ccggtctccttcccagaaggcagtgccgcaaggcgagtaaggcgctgtccgagagttctc 500
Query: 301 ggagctccctctagtctgcgcctgccagctgcccgagtttggcgccccaggctgccatct 360
|||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||
Sbjct: 501 tgagctccctctagtctgcgcctgccaactgcccgagtttggtggcccaggctgccatct 560
Query: 361 ttgggagaagggatattgcaaggggagattgtgtgaggta 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgggagaagggatattgcaaggggagattgtgtgaggta 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_h23.g1 MSMg01no076_h23.g1 CHROMAT_FILE:
MSMg01no076_h23.g1 PHD_FILE: MSMg01no076_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:29 2005
(214 letters)
>mm_chr4_43038791_43039404
Length = 614
Score = 346 bits (179), Expect = e-100
Identities = 206/215 (95%), Gaps = 1/215 (0%)
Strand = Plus / Minus
Query: 1 cactttgtagaccaggctgacctggaactcag-aatacgcctgcctctgcctcccaagtg 59
|||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||
Sbjct: 522 cactttgtagaccaggctgacctggaactcagaaatccgcctgcttctgcctcccaagtg 463
Query: 60 ctgggattaaaggcgtgtgccaccattgcccggctagtttatgttttttgttactgtgaa 119
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ctgggattaaaggcgtgcaccaccattgcccggctagtttatgttttttgttactgtgaa 403
Query: 120 agagtgctcttgacaagaacatctaaaggagcttgttaccagacagttttagtccatcac 179
| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 402 aaagtgctcttgacaagaacatctaaaggagctagttaccagacagttttagttcatcac 343
Query: 180 gtgagggaagtctcagcagtgagaacttgaagcat 214
| |||||||||||||||||||||||||||||||||
Sbjct: 342 gggagggaagtctcagcagtgagaacttgaagcat 308
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
