CGTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAATTGTGCGTGTAACTCCACATCAGTGCCTTCCCTGGAGTTGAT
GTTACATCCTTTCAAATTTTCATTGTATCACCAAAGATCCCACCCATGCT
CAGAGGCCCTCTTGACAGAACATTGACATCTAAATGCGTGGGAGCTTGGG
GTGGACATCAAGTAAGGCTGGTGTTCATCTCAGATTGTATTTAACAGACA
TCTCTCCATGGCTTTCTAATCCCCTTAACAAATGAAAGAAACACCACTTT
GATGTTTTCTAAATCCTTATTTTGCCCTTTGAGACTAGGTTTTATCTAAG
GAATATTTGTATTCTCTTTAAAAAACAAAAAGAAAAAAGAAAAAAGAAAA
AAGGACTTCTGGCTTCAAGAAAAATCTATTAAGCACTATCCTTTAGGCAA
AAAGAAAAAACTTCCAGGTGGCATTTGCATATATTTTTAATACAATTCTG
AAACTGCTTTTCATATAATTAGTTCTCAAAATATGTACTCATTGCAATTT
TATAGTTAAAGTTACTTTGCTATTCCTGTTGAAATACTTAAAGTAAAGCC
AAGCAGTTCTTGATAGAAAAATCTTACCAGTGTCTGAAAAAGCATAAAAG
AATGTTTTGCTATTATATATTATGAAGTGAGAATTTAACCATN

NCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAG
AAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAAT
CAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCA
AAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATC
AGTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAG
CAATACCTCTCCTGGGCATATATACAGAAGATGCCCCAACAGGTAAGAAG
GACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAG
CTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGT
GGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACACATTCACAAAGAAACTCACACAATATGTACTCACTGATAAGTG
GATATTAGCCCCAAACCTAGGATACCCAAGATATAAGA

Query= MSMg01no078_h12.b1 MSMg01no078_h12.b1 CHROMAT_FILE:
MSMg01no078_h12.b1 PHD_FILE: MSMg01no078_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:48 2005
         (536 letters)



>mm_chr4_19813154_19814089
          Length = 936

 Score = 1029 bits (532), Expect = 0.0
 Identities = 535/536 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtaactccacatcagtgccttccctggagttgatgttacatcctttcaaattttcattgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gtaactccacatcagtgccttccctggagttgatgttacatcctttcaaattttcattgt 677

                                                                       
Query: 61  atcaccaaagatcccacccatgctcagaggccctcttgacagaacattgacatctaaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 atcaccaaagatcccacccatgctcagaggccctcttgacagaacattgacatctaaatg 617

                                                                       
Query: 121 cgtgggagcttggggtggacatcaagtaaggctggtgttcatctcagattgtatttaaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cgtgggagcttggggtggacatcaagtaaggctggtgttcatctcagattgtatttaaca 557

                                                                       
Query: 181 gacatctctccatggctttctaatccccttaacaaatgaaagaaacaccactttgatgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gacatctctccatggctttctaatccccttaacaaatgaaagaaacaccactttgatgtt 497

                                                                       
Query: 241 ttctaaatccttattttgccctttgagactaggttttatctaaggaatatttgtattctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ttctaaatccttattttgccctttgagactaggttttatctaaggaatatttgtattctc 437

                                                                       
Query: 301 tttaaaaaacaaaaagaaaaaagaaaaaagaaaaaaggacttctggcttcaagaaaaatc 360
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 436 tttaaaaaacaaaaagaaaaaagaaaaaagaaaaaaggacttctggtttcaagaaaaatc 377

                                                                       
Query: 361 tattaagcactatcctttaggcaaaaagaaaaaacttccaggtggcatttgcatatattt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tattaagcactatcctttaggcaaaaagaaaaaacttccaggtggcatttgcatatattt 317

                                                                       
Query: 421 ttaatacaattctgaaactgcttttcatataattagttctcaaaatatgtactcattgca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ttaatacaattctgaaactgcttttcatataattagttctcaaaatatgtactcattgca 257

                                                                   
Query: 481 attttatagttaaagttactttgctattcctgttgaaatacttaaagtaaagccaa 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 attttatagttaaagttactttgctattcctgttgaaatacttaaagtaaagccaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space:   487076
Effective search space used:   487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)