Query= MSMg01no078_m11.b1 MSMg01no078_m11.b1 CHROMAT_FILE:
MSMg01no078_m11.b1 PHD_FILE: MSMg01no078_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:12 2005
(208 letters)
>mm_chr4_98532410_98533017
Length = 608
Score = 269 bits (139), Expect = 9e-77
Identities = 139/139 (100%)
Strand = Plus / Plus
Query: 70 aagacttgcaatgaaacaagcgttttctgaccaggaagaataacagagacaaacagagcc 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aagacttgcaatgaaacaagcgttttctgaccaggaagaataacagagacaaacagagcc 329
Query: 130 ccagatggttttatttgctgagctgtgtgtctgttccgcacagtttcctgagctccacgc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ccagatggttttatttgctgagctgtgtgtctgttccgcacagtttcctgagctccacgc 389
Query: 190 tctttttgttaatttgcat 208
|||||||||||||||||||
Sbjct: 390 tctttttgttaatttgcat 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 208
Length of database: 608
Length adjustment: 9
Effective length of query: 199
Effective length of database: 599
Effective search space: 119201
Effective search space used: 119201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no078_m11.g1 MSMg01no078_m11.g1 CHROMAT_FILE:
MSMg01no078_m11.g1 PHD_FILE: MSMg01no078_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:12 2005
(220 letters)
>mm_chr4_98689127_98689747
Length = 621
Score = 397 bits (205), Expect = e-115
Identities = 217/221 (98%), Gaps = 1/221 (0%)
Strand = Plus / Minus
Query: 1 actcatctctgtggctctaagctaagtagcaattaaaacaaacaaactaac-aagaaaac 59
||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||
Sbjct: 421 actcatctctgtggctctaagctaagtagcaattaaaacaaacaaacaaacaaacaaaac 362
Query: 60 ccattgagaatggtgaagtgctttatggacgactgacacagagtcgaccagaggagatca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccattgagaatggtgaagtgctttatggacgactgacacagagtcgaccagaggagatca 302
Query: 120 gagtcgggagaggaggcctgatgagatagtgagtaaggaccttaccaagaactcacctct 179
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagtcgggagaggatgcctgatgagatagtgagtaaggaccttaccaagaactcacctct 242
Query: 180 cccttgttctgatgtgaaatggtaatgacagtgagtctggc 220
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cccttgttctgatgtgaaatggtaatgacagtgagtctggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 621
Length adjustment: 9
Effective length of query: 211
Effective length of database: 612
Effective search space: 129132
Effective search space used: 129132
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
