GCGGCGCTAATACGACTCCTATAGTTCCAGGATCCGCGGAATTCAAATAC
TTTTCAAACCTTACTATGTGCAACTATCATATCCCATACAAATTTTATGA
TAGGAATAAATTGACTGTCTTCTGCTTTTAACTGGTTTTAGAGATAATGT
CTCAATGTGTTGGCTTGGAACTCCTATGTAGGCCAGACTGACCTATGACT
CACTAGATCTGAGCCTGTCTCCAGAGTGCTAAGATTGAAAGCATGTACTA
CCACACATGGCTTATAAATTTGATAAACTATAATAGATTGTAATGCAGAT
GCAAGTTGGCTATATGCTCATATTTTATCAAATTGAATGAAGCAACTAAT
ATGTTCTACTTAGAACACCAGTGAAGACAGATGTGGGCATTTCCCTGCAG
GAGGATAGAGCTCTTTGGGATACCCAGGAGTGGTGTTCCTGAATCACATG
GTATTCTATTTCTGAATTTTGAGTAAACGCCACATTGTGTTCCTAATGAC
TCTAACTAGTTAGGCCTCCCTCCAGGGATGAATAAGGGTTCTCCTTACCC
ATCCCGCACCAGCATTTGTTGGTTGTTGTTTTTGTTTGTTTATTTATTTG
TTTGTTTTATTTTGTTTCTGGGATCTATTCTGGCTGGAGTGAGTGCAGAG
GGATGGAATCTTAAAGTAGTCTTCTAATGGCTAAGAACGTTGAACATGTT
TTAGTTATTTGCTAGTCAGTCCTAGTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTATAGGCTGCATGTTTTTAGTTTAAAGGAGAGATAGA
ATGAATCGCAGTCTCTAAGGAGTATGACATTTATTTAAGACTTTCTAGGT
GGGAAGAAAACATGCCCTTGGTTTTCAAATCCTGAACAAGGGACAATTAA
ACAGTTGTGAGCCTAGTCCCATCATCAGCAAGCCCAGCACTGAAAGTTTT
GCTGAATGTGTCAAGTTTGAGTATGCTCCAGGCTCATTCTGATAGGCACT
ATCACATTTTGTTCACACAGCGCCACATGTTCACACTGACTTATCTAAAA
TCCATGCACTTTAACGCTTTGGCCGGCTCTCCCTGAGGATCACACATGCT
TCATTCATAGGCTGAATGCTCCATATGTGTCTTACGGGAGTTCAGTGTAA
GTACTAGCTAAACTGTCGCCCCTGCACTGAAAGCTCTGACATTCCATATC
ATCCTTGGTCCTGCCTTGGCTAACCTTAGACATTTGTTTTCTACTGTTGG
AGCAGGAACCCGAGAAAAGTTAGAATGACAGCAGGGTATCGGCAGATACC
ACTTGGCATCCTTAATTCATCCAAATCATGCTACAGTTTTGAATTTAAAT
GTTGGTTTCCTGTGGGATAATTTTTCCCTTCTTCTTCCTGGCACAATGCT
CTTTGAATGGCAAACAGTACGCTTGGG

Query= MSMg01no079_f21.g1 MSMg01no079_f21.g1 CHROMAT_FILE:
MSMg01no079_f21.g1 PHD_FILE: MSMg01no079_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:59 2005
         (600 letters)



>mm_chr4_14302316_14303315
          Length = 1000

 Score = 1152 bits (596), Expect = 0.0
 Identities = 599/600 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tataggctgcatgtttttagtttaaaggagagatagaatgaatcgcagtctctaaggagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tataggctgcatgtttttagtttaaaggagagatagaatgaatcgcagtctctaaggagt 741

                                                                       
Query: 61  atgacatttatttaagactttctaggtgggaagaaaacatgcccttggttttcaaatcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atgacatttatttaagactttctaggtgggaagaaaacatgcccttggttttcaaatcct 681

                                                                       
Query: 121 gaacaagggacaattaaacagttgtgagcctagtcccatcatcagcaagcccagcactga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaacaagggacaattaaacagttgtgagcctagtcccatcatcagcaagcccagcactga 621

                                                                       
Query: 181 aagttttgctgaatgtgtcaagtttgagtatgctccaggctcattctgataggcactatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aagttttgctgaatgtgtcaagtttgagtatgctccaggctcattctgataggcactatc 561

                                                                       
Query: 241 acattttgttcacacagcgccacatgttcacactgacttatctaaaatccatgcacttta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acattttgttcacacagcgccacatgttcacactgacttatctaaaatccatgcacttta 501

                                                                       
Query: 301 acgctttggccggctctccctgaggatcacacatgcttcattcataggctgaatgctcca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acgctttggccggctctccctgaggatcacacatgcttcattcataggctgaatgctcca 441

                                                                       
Query: 361 tatgtgtcttacgggagttcagtgtaagtactagctaaactgtcgcccctgcactgaaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tatgtgtcttacgggagttcagtgtaagtactagctaaactgtcgcccctgcactgaaag 381

                                                                       
Query: 421 ctctgacattccatatcatccttggtcctgccttggctaaccttagacatttgttttcta 480
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 380 ctctgacattccatatcatccttggtcctgctttggctaaccttagacatttgttttcta 321

                                                                       
Query: 481 ctgttggagcaggaacccgagaaaagttagaatgacagcagggtatcggcagataccact 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctgttggagcaggaacccgagaaaagttagaatgacagcagggtatcggcagataccact 261

                                                                       
Query: 541 tggcatccttaattcatccaaatcatgctacagttttgaatttaaatgttggtttcctgt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tggcatccttaattcatccaaatcatgctacagttttgaatttaaatgttggtttcctgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space:   584100
Effective search space used:   584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)