Query= MSMg01no082_e03.b1 MSMg01no082_e03.b1 CHROMAT_FILE:
MSMg01no082_e03.b1 PHD_FILE: MSMg01no082_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:41 2005
(132 letters)
>mm_chr4_71089357_71089887
Length = 531
Score = 240 bits (124), Expect = 3e-68
Identities = 130/132 (98%), Gaps = 1/132 (0%)
Strand = Plus / Plus
Query: 1 tgtatgtacccagggactcaagtaatgggcccataaaaaaattcaataaagaaatgtttt 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 tgtatgtacccagggactcaagtaatgggcccataaaaaa-ttcaataaagaaatgtttt 259
Query: 61 aatcaaaatacatggtctgatgtcacagaggcactagaattctcgtttacaactggaaag 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 260 aatcaaaatacatggtctgatgtcacagaggcactagaattctcatttacaactggaaag 319
Query: 121 cagtgcccagaa 132
||||||||||||
Sbjct: 320 cagtgcccagaa 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 132
Length of database: 531
Length adjustment: 8
Effective length of query: 124
Effective length of database: 523
Effective search space: 64852
Effective search space used: 64852
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no082_e03.g1 MSMg01no082_e03.g1 CHROMAT_FILE:
MSMg01no082_e03.g1 PHD_FILE: MSMg01no082_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:41 2005
(248 letters)
>mm_chr4_71241791_71242437
Length = 647
Score = 230 bits (119), Expect = 5e-65
Identities = 125/127 (98%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 122 gacataagttttgaaggtttaagtatctcatagaaactcaagcaagttagataaattcat 181
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 447 gacat-agttttgaaggtttaagtatctcaaagaaactcaagcaagttagataaattcat 389
Query: 182 tgtgcatgtgtgtttgtgtatccatacacactcaagatgttgaagcaattaaattaagtt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tgtgcatgtgtgtttgtgtatccatacacactcaagatgttgaagcaattaaattaagtt 329
Query: 242 attgaga 248
|||||||
Sbjct: 328 attgaga 322
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 647
Length adjustment: 9
Effective length of query: 239
Effective length of database: 638
Effective search space: 152482
Effective search space used: 152482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
