Query= MSMg01no082_n21.b1 MSMg01no082_n21.b1 CHROMAT_FILE:
MSMg01no082_n21.b1 PHD_FILE: MSMg01no082_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:27 2005
(167 letters)
>mm_chr4_19432174_19432740
Length = 567
Score = 267 bits (138), Expect = 3e-76
Identities = 141/142 (99%)
Strand = Plus / Plus
Query: 1 acctgcctttcttttcccaccaaaagaagagacaccccgaatgcttaaagttctcctagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctgcctttcttttcccaccaaaagaagagacaccccgaatgcttaaagttctcctagg 260
Query: 61 aaacacaggaaaggtggaccttggaagactccttaaaggaaagagaaaaacaaccactca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacacaggaaaggtggaccttggaagactccttaaaggaaagagaaaaacaaccactca 320
Query: 121 ggtaacaaggctgacttgaggc 142
||||||||||||||| ||||||
Sbjct: 321 ggtaacaaggctgacctgaggc 342
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 567
Length adjustment: 8
Effective length of query: 159
Effective length of database: 559
Effective search space: 88881
Effective search space used: 88881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no082_n21.g1 MSMg01no082_n21.g1 CHROMAT_FILE:
MSMg01no082_n21.g1 PHD_FILE: MSMg01no082_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:27 2005
(104 letters)
>mm_chr4_19501180_19501685
Length = 506
Score = 155 bits (80), Expect = 8e-43
Identities = 99/106 (93%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 1 tagataccccggttctttcctgggtaggaacacataacaaataagacaggttatatcc-- 58
|||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 306 tagataccccagttctttcctgggtagggacacataaaaaataagacaggttatatccga 247
Query: 59 gagagagagagagaaatcagattttaatttaacttacatttgttgt 104
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 246 gagagagagagagaaatcagattttaatttaacttttatttgttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 506
Length adjustment: 8
Effective length of query: 96
Effective length of database: 498
Effective search space: 47808
Effective search space used: 47808
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
