Query= MSMg01no083_k07.b1 MSMg01no083_k07.b1 CHROMAT_FILE:
MSMg01no083_k07.b1 PHD_FILE: MSMg01no083_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:25 2005
(462 letters)
>mm_chr4_91360265_91361127
Length = 863
Score = 855 bits (442), Expect = 0.0
Identities = 454/458 (99%), Gaps = 1/458 (0%)
Strand = Plus / Minus
Query: 4 ggaattcactatctgtacattcctgacagtccagataggacaatgccaatagtttccagt 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggaattcactatctgtagattcctgacagtccagataggacaatgccaatagtttccagt 602
Query: 64 tgcgaaatctccatcatacaagtcagaattatgtctgtttaacatgccaaaaaagcagtc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgcgaaatctccatcatacaagtcagaattatgtctgtttaacatgccaaaaaagcagtc 542
Query: 124 aaattgagcaaagatcagtcctggtcaaagtctggagtcatggcaaaaagctgcagttct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaattgagcaaagatcagtcctggtcaaagtctggagtcatggcaaaaagctgcagttct 482
Query: 184 gtgatgtcaggatgtagcattctgatgtctttgttttggatttctgaaccatgcttgc-a 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 481 gtgatgtcaggatgtagcattctgatgtctttgttttggatttctgaaccatgcttgcaa 422
Query: 243 aaaattcctaacagaggacagattcaattttctggtctgatctttatgtatgaattttct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaattcctaacagaggacagattcaattttctggtctgatctttatgtatgaattttct 362
Query: 303 ttcacaattgggaaacagtcaaatcaaggtcttaccctacatatggatcacttagttgct 362
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcacaaatgggaaacagtcaaatcaaggtcttaccctacatatggatcacttagttgct 302
Query: 363 acaaaaggccaactaatatcctggtgcataaatatggaagaatttcatttttcctcatga 422
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaaaaggcaaactaatatcctggtgcataaatatggaagaatttcatttttcctcatga 242
Query: 423 gctaaatgtgaatgttaatctatatgtatttctccact 460
||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctaaatgtgaatgttaatctatatgtatttctccact 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 863
Length adjustment: 10
Effective length of query: 452
Effective length of database: 853
Effective search space: 385556
Effective search space used: 385556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_k07.g1 MSMg01no083_k07.g1 CHROMAT_FILE:
MSMg01no083_k07.g1 PHD_FILE: MSMg01no083_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:25 2005
(339 letters)
>mm_chr4_91219909_91220647
Length = 739
Score = 630 bits (326), Expect = 0.0
Identities = 335/338 (99%), Gaps = 2/338 (0%)
Strand = Plus / Plus
Query: 1 gctagcctggtctac-aattgagttccaggacagtcagggctatacagagaaaccctgtc 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gctagcctggtctacaaattgagttccaggacagtcagggctatacagagaaaccctgtc 260
Query: 60 tcaaaaaaagaaaaaaaaaaaaaggtttgataggaaaacttttgttttctggctccaaat 119
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaaaaaa-aaaaaaaaaaaaaggtttgataggaaaacttttgttttctggctccaaat 319
Query: 120 ttccctgatctgaggcagtttctccttcatgtcctctgtagactactcattctttgcttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttccctgatctgaggcagtttctccttcatgtcctctgtagactactcattctttgcttt 379
Query: 180 tctttcctttttaagattttacttttaaaagttcatgtgtatgaacatttgcctgcatgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctttcctttttaagattttacttttaaaagttcatgtgtatgaacatttgcctgcatgt 439
Query: 240 atgtatatgtactacacatgtacagtgcctttggataccaggagagggaatcagatcccc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atgtatatgtactacacatgtacagtgcctttggataccaggagagggaatcagatcccc 499
Query: 300 tggaattggagttgtatttacttgtgaggtgccatatg 337
|||||||||||||||||||||||||||| |||||||||
Sbjct: 500 tggaattggagttgtatttacttgtgagatgccatatg 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
