Query= MSMg01no087_e23.b1 MSMg01no087_e23.b1 CHROMAT_FILE:
MSMg01no087_e23.b1 PHD_FILE: MSMg01no087_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:23 2005
(287 letters)
>mm_chr4_82245009_82245695
Length = 687
Score = 501 bits (259), Expect = e-146
Identities = 280/287 (97%)
Strand = Plus / Plus
Query: 1 acaaaatttttaaaagatgtaagcagaattttggaatgtttgattaaattcagggtctat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 acaaaatttttaaaagatgtaagcagaattttggaatgtttgattaaatttagggtctat 260
Query: 61 gaatacaaggggtgactcagaggtttcctgccagcttgggatgttgtgttgctatttctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatacaaggggtgactcagaggtttcctgccagcttgggatgttgtgttgctatttctg 320
Query: 121 aaggtaacttagtgtcactccagaacacatgcatagacccaatactaagcttttactgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggtaacttagtgtcactccagaacacatgcatagacccaatactaagcttttactgac 380
Query: 181 catgacaaactcagttttcaattctacatttgcaaaagaatatttagtaaaacgcagcat 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 381 catgacaaactcagttttcaattctacatttgcaaaagattatttagtaaaactcagcat 440
Query: 241 ctgatgactgattagaatgagagagagagagagagagagagagagag 287
|||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 441 ctgatgacagaaaagaatgagagagggagagagagagagagagagag 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no087_e23.g1 MSMg01no087_e23.g1 CHROMAT_FILE:
MSMg01no087_e23.g1 PHD_FILE: MSMg01no087_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:23 2005
(166 letters)
>mm_chr4_82415224_82415791
Length = 568
Score = 296 bits (153), Expect = 5e-85
Identities = 164/169 (97%), Gaps = 4/169 (2%)
Strand = Plus / Minus
Query: 1 tgggctggtggggttgtttgctccctgtgcttagtgcctttcattctgttgttccaaagt 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgggctgg-ggggttgtttgctccctgtgcttagtgcctttcattctgttgttccaaagt 310
Query: 61 ggacttactttctggtacaaagtctgtcctatcttttcttt---ttcttttactcgcgct 117
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 309 ggacttactttctggtacaaagtctgtcctatcttttctttcttttcttttactcgctct 250
Query: 118 gttccttttcactgttttaaaaatgacaattttccctcggagttttagc 166
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gttccttttcactgttttaaaaatgacaattttccctcggagttttagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 568
Length adjustment: 8
Effective length of query: 158
Effective length of database: 560
Effective search space: 88480
Effective search space used: 88480
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
