Query= MSMg01no088_a10.b1 MSMg01no088_a10.b1 CHROMAT_FILE:
MSMg01no088_a10.b1 PHD_FILE: MSMg01no088_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:21 2005
(427 letters)
>mm_chr4_6918999_6919825
Length = 827
Score = 787 bits (407), Expect = 0.0
Identities = 422/427 (98%)
Strand = Plus / Plus
Query: 1 ttaggggcctaagaccctgtaaaaaagtggaaaattcatgtccacaggtatctgtttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaggggcctaagaccctgtaaaaaagtggaaaattcatgtccacaggtatctgtttctg 260
Query: 61 gcgtcaaagaatatatggaaacagtcttgttacctcccatcccccaccccaaaccgtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgtcaaagaatatatggaaacagtcttgttacctcccatcccccaccccaaaccgtttt 320
Query: 121 tagtacatggtgggtaatagccagctactctctagctctctgcagccttatccaggtttc 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 tagtacatggtgggtaatagccagctactctctagctctctgcagccttttccaggtttc 380
Query: 181 tcttcccttataataggcgcaccagtcaaatgcaaagatctgaggaagcaacagatgccc 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttcccttataataggagcaccagtcaaatgcaaagatctgaggaagcaacagatgccc 440
Query: 241 tgtaatgttattaaattagcatcctggggttctctcctctatgcaaaggcctttggaaac 300
||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtaaggatagtaaattagcatcctggggttctctcctctatgcaaaggcctttggaaac 500
Query: 301 ttttccttgactttggtttccatccatggtagcctctttctcttaaactgttgtcctcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttccttgactttggtttccatccatggtagcctctttctcttaaactgttgtcctcag 560
Query: 361 gtcttccttttatgggtaggaagaacacagcttcttaccttaagagtaatgtgatggatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcttccttttatgggtaggaagaacacagcttcttaccttaagagtaatgtgatggatg 620
Query: 421 ttggctt 427
|||||||
Sbjct: 621 ttggctt 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_a10.g1 MSMg01no088_a10.g1 CHROMAT_FILE:
MSMg01no088_a10.g1 PHD_FILE: MSMg01no088_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:21 2005
(341 letters)
>mm_chr4_7087919_7088660
Length = 742
Score = 615 bits (318), Expect = e-180
Identities = 336/342 (98%), Gaps = 1/342 (0%)
Strand = Plus / Minus
Query: 1 tttgaattcaaactgcattgcc-caattattggacagattgaatatctcttattatgctt 59
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 449 tttgaattcaaactgcattgccacaattattggacagattgaatatttcttattatgctt 390
Query: 60 ttgggtaaatatagacacctgaggtaaccacagataccaataatgtagagtataggtttt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttgggtaaatatagacacctgaggtaaccacagataccaataatgtagagtataggtttt 330
Query: 120 aaatgattttatatgtttttgtcactaagatatattgaggcagataattgaagtgacagc 179
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 329 aaatgattttatatgtttttgtcacaaagatatattgaggcagataattgaagtgacagc 270
Query: 180 tgttttcccttcatttaatgtttccagatatgtaaacatctttcactattgtacaatatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgttttcccttcatttaatgtttccagatatgtaaacatctttcactattgtacaatatt 210
Query: 240 aaacaaatacacattttttatttataaattttaaaaattcaaaagaagttcaaaaaataa 299
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 209 aaacaaatataaattttttatttataaattttaaaaattcaaaagaagttcaaaaaacaa 150
Query: 300 accagtattgttactgttttaaccagttaacatttgaacata 341
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 accagtattgttactgttttaaccagttaacatttgaacata 108
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 742
Length adjustment: 9
Effective length of query: 332
Effective length of database: 733
Effective search space: 243356
Effective search space used: 243356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
