Query= MSMg01no091_e11.b1 MSMg01no091_e11.b1 CHROMAT_FILE:
MSMg01no091_e11.b1 PHD_FILE: MSMg01no091_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:44 2005
(344 letters)
>mm_chr4_84806487_84807230
Length = 744
Score = 590 bits (305), Expect = e-173
Identities = 332/341 (97%)
Strand = Plus / Plus
Query: 1 atattacaagctcagagtgtagtgaggctgtagtgtagtgtgcctgcctaggatggcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 201 atattacaagctcagagtgtagtgaggctgtagtgtagtgtgcctgcctagcatggcaga 260
Query: 61 ctcggggtccagtccttgatcctgaaaagcaggggtgggatattaggtactaagtaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcggggtccagtccttgatcctgaaaagcaggggtgggatattaggtactaagtaagga 320
Query: 121 aatttaaagacgcctggataaactatcaataatcatctatcaataatgattcatcaagcc 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 321 aatttaaagacgcctggataaactatcaataatcatctatcaatactgattcatcgagcc 380
Query: 181 taagagatgcttcatatctccaatccaaatccctctttccctgaaagtgggatgctaaga 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 381 taagagatgcttcatatctccaatccaaatccctgtttccctgaaagtgggatgctagga 440
Query: 241 caagcaccttggtacccttgctgagctatctggactttcttatgggggcagcaagcgttc 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 caagcaccttggtacccttgctgagctatctggactttctcatgggggcagcaagcgttc 500
Query: 301 aactgtgcttgttcctggcagtctcttcctggagatttcaa 341
|||||||||||||||||||||||| |||||||||| |||||
Sbjct: 501 aactgtgcttgttcctggcagtcttttcctggagagttcaa 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_e11.g1 MSMg01no091_e11.g1 CHROMAT_FILE:
MSMg01no091_e11.g1 PHD_FILE: MSMg01no091_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:44 2005
(396 letters)
>mm_chr4_84966597_84967390
Length = 794
Score = 675 bits (349), Expect = 0.0
Identities = 391/421 (92%), Gaps = 27/421 (6%)
Strand = Plus / Minus
Query: 1 caagcatgaagatgtgattttcttagcacttacatttggatggacaagtaagtaactaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caagcatgaagatgtgattttcttagcacttacatttggatggacaagtaagtaactaca 682
Query: 61 aacaatgggggtatgtaagatgatacacacttaggaagtcaccctaagaccctttag--- 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacaatgggggtatgtaagatgatacacacttaggaagtcaccctaagaccctttagatt 622
Query: 118 -------------------cataa---agacagaatttggattaccaacagcaagttcaa 155
|| || |||||||||||||||||||||||||||||||||
Sbjct: 621 agacagaatttagattagacagaatttagacagaatttggattaccaacagcaagttcaa 562
Query: 156 ggctgctgataagtgccattctgttttgatgaaacctaagtatatttaaataagttagct 215
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggctgctgataa--gccattctgttttgatgaaacctaagtatatttaaataagttagct 504
Query: 216 ggagactgaaatgagacattagaaattcatttagattgtgttcatgaatataccaaggtt 275
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggagactgaaatgagacaatagaaattcatttagattgtgttcatgaatataccaaggtt 444
Query: 276 aaaagttcacaaggagtccaaggtcttggtcaagcttacagagcatccaagacacacagt 335
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaaagttcacaaggagtcaaaggtcttggtcaagcttacagagcatccaagacacacagt 384
Query: 336 tctgccagatatgacagcacatcttccacctggggtatcctcccaggctattctcctaag 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tctgccagatatgacagcacatcttccacctggggtatcctcccaggctattctcctaag 324
Query: 396 t 396
|
Sbjct: 323 t 323
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 794
Length adjustment: 9
Effective length of query: 387
Effective length of database: 785
Effective search space: 303795
Effective search space used: 303795
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
