ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTA
GCCAACATCAAAGTAAATGGTAAGAAGCTGGATGCAATCCCACTAAAATC
AAGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTATTCAACATTGTAC
TTGAAGTCCTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATA
CAAATTGGAAAGGAAGAAGTCAAAATATCACTTTTTGCAGATGATATGAT
AGTATATATAAGTGACCCTAAAAGTTCCACCAGAGAACTCCTAAACCTGA
TAAAAAGCTTCAGTGAAGTAGCTGGATATAAAATTAACTCAAACAAGTCA
ATGGCCTTTCTGTACACCCAGGATAAACAGGCTGAGAAAGAGATTAGGGA
AACAACACCCTTCTCAATAGTCACAAATAATATAAAATACCTTGGCGTGA
CTCTAACTAAGGAAGTGAAAGATCTGTATGATAAGAACTTCAAGTCTCTG
AAGAAAGAAATTAAAAAAGATCTCAGAAGATGGAAAGATCTCCCATGCTC
ATGGATTGGCAGGATCAATATACCAAAAATGGCTATCTTGCCAAAAGCAA
TCTACTGATTCAATGCACTCTCCATCAAAATCCAACTCAATTCCTCAACG
AATTACAAAGAGTTTCCT

TTCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTGCCTTTGCCTCCTCAAAGTCCTTA
GGGACCCATATACTTCAACTCCCTGTTTCTCTATTATTATTATTATTATT
ATTATTATTATTATTATCATTATTATATACTATTATTATATACCATAAGG
CCCTCGAGCCATCCTGTATTGTCTTGATTTATAAATGACAGAAGATGCTT
ACAAAAGGGTACCTCACCTGGCTTGGTGGTCTCCCTTTAAGGAGCTTCAG
CACAAATCTGTGTCGGACCATTTTACTTAGTTCATTGGTCAACCTTTTGT
CACACATCTATATCTAACTGCAAGAGAACTTGTAGGGAGAGAGGGGGGAA
GACTGGTTAGTTCATATTGCTGTTCCTCTTATGGGGCTGCAAACCCCTTC
AGCTTCTTGGGTCCTTTCTCTAGTTCCTTCATTGGTGACCCTTTGCTCTG
TCCAATGGATGGCTATGAGTATCCACTTCTGTATTTGTCAGGCACTGGCA
GAGCCTCTCAGGAGACAGCTATATCAACCTCCCAGAGCTCTCTGGGACTA
AACCATCAACCAAAGAACACACATGGTGGGATTCATGGCTCTAGTTGCCT
ATGTTATCCCATGACGTCCTACCTGATCTTTCCTGGTAGAAGAGGCCCTT
GGCTCTGCGAAGGATCT

Query= MSMg01no091_n23.g1 MSMg01no091_n23.g1 CHROMAT_FILE:
MSMg01no091_n23.g1 PHD_FILE: MSMg01no091_n23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:31 2005
         (470 letters)



>mm_chr4_82208794_82209663
          Length = 870

 Score =  702 bits (363), Expect = 0.0
 Identities = 436/485 (89%), Gaps = 39/485 (8%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgcctttgcctcctcaaagtccttagggacccatatacttcaactccctgtttctctat 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 225 ctgcctttgcctcctcaaagtccttagggacccatatacttcaactccctgtttc----- 279

                                                                       
Query: 61  tattattattattattattattattattattatcattattatatactattattatatacc 120
                              |||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 -------------------attattattattatcattattatatactattattatatacc 320

                                                                       
Query: 121 ataaggccctcgagccatcctgtattgtcttgatttataaatgacagaagatgcttacaa 180
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataaggccctctagccatcctgtattgtcttgatttataaatgacagaagatgcttacaa 380

                                                                       
Query: 181 aagggtacctcacctggcttggtggtctccctttaaggagcttcagcacaaatctgtgtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagggtacctcacctggcttggtggtctccctttaaggagcttcagcacaaatctgtgtc 440

                                                                       
Query: 241 ggaccattttacttagttcattggtcaaccttttgtcacacatctatatctaactgcaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaccattttacttagttcattggtcaaccttttgtcacacatctatatctaactgcaag 500

                                                                       
Query: 301 agaacttgtagggagaga---------------ggggggaagactggttagttcatattg 345
           ||||||||||||||||||               |||||||||||||||||||||||||||
Sbjct: 501 agaacttgtagggagagatgtagtcttttaaaaggggggaagactggttagttcatattg 560

                                                                       
Query: 346 ctgttcctcttatggggctgcaaaccccttcagcttcttgggtcctttctctagttcctt 405
            ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 561 ttgttcctcttatggggctgcaaaccccttcatctccttgggtcctttctctagttcctt 620

                                                                       
Query: 406 cattggtgaccctttgctctgtccaatggatggctatgagtatccacttctgtatttgtc 465
           |||||| || ||| ||||||||||||| ||||||| |||| |||||||||||||||||||
Sbjct: 621 cattggggatcctgtgctctgtccaatagatggctgtgagcatccacttctgtatttgtc 680

                
Query: 466 aggca 470
           |||||
Sbjct: 681 aggca 685


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space:   395600
Effective search space used:   395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)