Query= MSMg01no092_e15.b1 MSMg01no092_e15.b1 CHROMAT_FILE:
MSMg01no092_e15.b1 PHD_FILE: MSMg01no092_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:06 2005
(159 letters)
>mm_chr4_79988660_79989214
Length = 555
Score = 255 bits (132), Expect = 8e-73
Identities = 150/158 (94%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 1 attctcctagcattcaccctcagccccttgggatgctttggctatttttgtttgtttgtt 60
||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 201 attctcctagcattcaccctcagccccttgggatgctttggatatt----tttgtttgtt 256
Query: 61 ttctttttatatgaatattagtttttgttctgtgacaagtgtattgtgtcttggctttca 120
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 257 ttatttttatatgaatattagtttttgttctgtgaaaagtgtattgtgtcttggctttca 316
Query: 121 ttgaaactgtagattgtttgataagatgtccacttgca 158
|||||||||||||||||||||||||||| |||||||||
Sbjct: 317 ttgaaactgtagattgtttgataagatgcccacttgca 354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 555
Length adjustment: 8
Effective length of query: 151
Effective length of database: 547
Effective search space: 82597
Effective search space used: 82597
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no092_e15.g1 MSMg01no092_e15.g1 CHROMAT_FILE:
MSMg01no092_e15.g1 PHD_FILE: MSMg01no092_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:06 2005
(303 letters)
>mm_chr4_80017745_80018447
Length = 703
Score = 540 bits (279), Expect = e-158
Identities = 297/303 (98%)
Strand = Plus / Minus
Query: 1 atttggtggtaaagaaaaatgaattgatgaaatttctaggaatctgttgaatctgtaaaa 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 503 atttggtggtaaagaaaaatgaattgatgaaatttctaggaatctggtgaatctgtaaaa 444
Query: 61 tataataattgaggtccaaaaagataaatgctgtttggttttagtaatgtgtagatgcta 120
||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 443 tataataattgagatccagaaagataaatgctgtttggtcttagtaatgtgtagatgcta 384
Query: 121 tttatggttagttgtattagtgtacttaaagttttattcaggaaaagccaagaaaggcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tttatggttagttgtattagtgtacttaaagttttattcaggaaaagccaagaaaggcct 324
Query: 181 aaaaagaacattagagagagggatctgggctctggtctagcatttgacaatgaaagtgga 240
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 323 aaaaagaacattagagagagggatctgagctctggtctagcatttgaaaatgaaagtgga 264
Query: 241 gagatagtaaggttgaaagatctaaacgatgagagaacaagttaattgagtataggtctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gagatagtaaggttgaaagatctaaacgatgagagaacaagttaattgagtataggtctt 204
Query: 301 gga 303
|||
Sbjct: 203 gga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
