Query= MSMg01no092_h08.b1 MSMg01no092_h08.b1 CHROMAT_FILE:
MSMg01no092_h08.b1 PHD_FILE: MSMg01no092_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:19 2005
(440 letters)
>mm_chr4_50972977_50973817
Length = 841
Score = 806 bits (417), Expect = 0.0
Identities = 432/437 (98%), Gaps = 1/437 (0%)
Strand = Plus / Minus
Query: 5 gaattccttttc-tccagcaaactcttaggaaagccagaaggaagggtttttatattaca 63
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gaattccttttcaacaagcaaactcttaggaaagccagaaggaagggtttttatattaca 447
Query: 64 gaacattagaaataccattaagaacaccataaactgcacattagaggcatcaaaataaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gaacattagaaataccattaagaacaccataaactgcacattagaggcatcaaaataaac 387
Query: 124 acatcatcccagatataaaatgaaaggcggccactgtgattgtctttatgtattatagat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 acatcatcccagatataaaatgaaaggcggccactgtgattgtctttatgtattatagat 327
Query: 184 ggtatctattgatgttctctccttgttcaacaggctaatattctcacagattcatctggt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggtatctattgatgttctctccttgttcaacaggctaatattctcacagattcatctggt 267
Query: 244 ccatcgagtcatgggatcttttctgaaagaaattcttttgaggggttattttaatctttt 303
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ccattgagtcatgggatcttttctgaaagaaattcttttgaggggttattttaatctttt 207
Query: 304 tatcctttccttttttatttaaaatagattcttttatcaaacagtatatcctgaccacat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tatcctttccttttttatttaaaatagattcttttatcaaacagtatatcctgaccacat 147
Query: 364 tttttctttttccattcttcccagaaacccaaccaacttccacttactcctagatccact 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tttttctttttccattcttcccagaaacccaaccaacttccacttactcctagatccact 87
Query: 424 attcttccatgtctctt 440
|||||||||| ||||||
Sbjct: 86 attcttccatctctctt 70
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 841
Length adjustment: 9
Effective length of query: 431
Effective length of database: 832
Effective search space: 358592
Effective search space used: 358592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_h08.g1 MSMg01no092_h08.g1 CHROMAT_FILE:
MSMg01no092_h08.g1 PHD_FILE: MSMg01no092_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:19 2005
(351 letters)
>mm_chr4_50805759_50806508
Length = 750
Score = 632 bits (327), Expect = 0.0
Identities = 345/351 (98%), Gaps = 1/351 (0%)
Strand = Plus / Plus
Query: 1 aataaaattttcataacaatgttttctacacagaagttgttcttattaataacagtataa 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagaattttcataacaatgttttctacacagaagttgttcttattaataacagtataa 260
Query: 61 accactgccattaaatcattttctggatgtgttgtaacaatattcaaaagtctgctgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accactgccattaaatcattttctggatgtgttgtaacaatattcaaaagtctgctgtga 320
Query: 121 gatgatatactttttagattctatagttgaaaaatacctgacaatttgaatgtgagtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgatatactttttagattctatagttgaaaaatacctgacaatttgaatgtgagtttt 380
Query: 181 aaatatagaaatggtaaaaatacatcctgtcacatgaacaaagacttcaatcaagaaatg 240
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 aaatata-aaatggtaaaaatacatcctgtcacatgaacaaagacttcagtcaagaaatg 439
Query: 241 aaaataaattctcttatttcaggctgtttttaaatctttcactatacctttaatgagaaa 300
|||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 440 aaaataaaatctcttattgcaggctgtttttaaatctttcgctatacctttaatgagaaa 499
Query: 301 cctataatcagtgtttgtaaatgcatgtgcattctttccttaatttatgtg 351
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cctataatcagtgtttgtaaatgcatgtgcattctttccttaatttatgtg 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 750
Length adjustment: 9
Effective length of query: 342
Effective length of database: 741
Effective search space: 253422
Effective search space used: 253422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
