Query= MSMg01no092_i18.b1 MSMg01no092_i18.b1 CHROMAT_FILE:
MSMg01no092_i18.b1 PHD_FILE: MSMg01no092_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:26 2005
(197 letters)
>mm_chr4_128070839_128071438
Length = 600
Score = 354 bits (183), Expect = e-102
Identities = 195/201 (97%), Gaps = 5/201 (2%)
Strand = Plus / Minus
Query: 1 gaagaaggaagggactcttgtgaattcctctagttcagccatgtgtgtgtcgtgtgtgt- 59
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 400 gaagaaggaagggactcttgtgaattcctctagttcagccatgtgtgtgt-gtgtgtgta 342
Query: 60 ---ggggggggtatgttcaaagtgtatcctgagtcagagaatgagcctcctgacacacgt 116
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tggggggggggcatgttcaaagtgtatcctgagtcagagaatgagcctcctgacacacgt 282
Query: 117 caagactgttcccgtgaagtccatccttgtgtctaagctaagtatcttcacctgcagcat 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 caagactgttcccgtgaagtccatccttgtgtctaagctaagtatcttcacctgcagcat 222
Query: 177 tgaggtcattgaagagctgag 197
|||||||||||||||||||||
Sbjct: 221 tgaggtcattgaagagctgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 600
Length adjustment: 8
Effective length of query: 189
Effective length of database: 592
Effective search space: 111888
Effective search space used: 111888
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no092_i18.g1 MSMg01no092_i18.g1 CHROMAT_FILE:
MSMg01no092_i18.g1 PHD_FILE: MSMg01no092_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:26 2005
(334 letters)
>mm_chr4_127909316_127910049
Length = 734
Score = 638 bits (330), Expect = 0.0
Identities = 333/334 (99%)
Strand = Plus / Plus
Query: 1 tctcagtgctgggagtgagacatgcgtgggaaccatagcagcacttcatgtccatagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcagtgctgggagtgagacatgcgtgggaaccatagcagcacttcatgtccatagcat 260
Query: 61 catcccaatcgttttgagttcaggatcctgcagaagataagggtgtcatcttttggggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcccaatcgttttgagttcaggatcctgcagaagataagggtgtcatcttttggggaa 320
Query: 121 ataccctgcagagaatggagaaccaacaggtaatctggatgtctaaaataaatctggagt 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 ataccctgcagagaatggagaaccaacaggcaatctggatgtctaaaataaatctggagt 380
Query: 181 ttcaaacagagggtcccagaaaagggccttctcttggtacactgtatatttgatgctaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaaacagagggtcccagaaaagggccttctcttggtacactgtatatttgatgctaga 440
Query: 241 gcacttacccatctggctccagggcatagtcctagcttgcatatcctccaaggagcctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcacttacccatctggctccagggcatagtcctagcttgcatatcctccaaggagcctgg 500
Query: 301 agacaagggttcaagtgcaagtagtttattggga 334
||||||||||||||||||||||||||||||||||
Sbjct: 501 agacaagggttcaagtgcaagtagtttattggga 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
