CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCACCTGAGGACTAGCGAAAGGCTGAGAAACACTTGAAAAAATGTTCA
ACATCCTTAATCATCAGAGAAATGCAAATCAAAACAACCCTGAGATTCCA
TCTCACACCAGTCAGAATGGCTAAGATAAAAAATTCAGGTGACAGCAGAT
GCTAGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGAT
TGCAAGCTTGTACAACCACTCTAGGTGGGTCTTAAAGTTGATTGATTCCC
ATCTTTCTGAGGAACTGTCACACCAATTTCCAAACTTGCTGTACATGTTT
GTACTCCTATCAGCACTGGATGAAAATTCTTTTACTCCACATCCTTGCAA
ACATGAGCTGTCACTTGTATTTATTTTTAGCCATTCTGAAAGTGTTAAAA
CAATATCTCATTGTTTTGATTCACATTTTCCTGAAGGCTAAGTACATTGA
ACACTTTTTTAGGTGTTTCTCAGCCATTTGAGTTGGCATTTGAAGAACTC
TCTGTTTAGATCTGTTTCCCATTTTTAAATTAACATATTTGTTTTCTTGA
TATCTACTTTGTGAGTTCTTTATATATTTTAGATACTAGCCCTCTGCTCA
ATGTGTAGTCTATAAAAAGAATCTTTTCTCACTCTATAGGCTGCTGCTTT
ACCCAAATGATAGTGT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACACTACCACACCCTGGACTGGAGCAC
TCTGACCACTGATTTCCACTTGGTAAAGTGTAACAAAGGACAAAGTAACC
CCATATATGATGAAATGGCATCCTTCCCAACGGGAAATTTGTAGCTATCA
AAGAAAGAGCCCCACCGATGGTCATTTGCAAAGGAGGCTGCTGTACAATT
GATTTATGTTAAAAAGACACTTGATATTTAAGGGGAATGAACTGTGTTCA
AGTGATAGAATTAACTGCACAAATAAAAGGCACATGTATTACTTGCAGCT
AAATATCACACAGAGTATACACCCAAGAGCGTGGCTGTAAATGTGGTGTG
TTTCCCATTAGAGACAGAGTCGGGACATTTGAGGTGGCCCTGTGGGTATT
AAAGAGTTCCCACAGCAGGGCTCTGTTCTCTTCTGAAAACCCTATTGGCA
ATGTCTCCCTTTGCCTGGTATCTGATAATATAACACTGGAACTGTTCCCA
CTAGATGCTCAGAGGCTGGCTAAGTGATAAGGTCATTACTCATGTTGAAT
ACTTGCTTCCTGCTGAAAGCTGGGAGTTTGGATGTATTCCAGGCAAAGGG
TTTTCAAGAGCAACACCTAATGTAAATATGGGCTCACAGTCTCTCATGAA
CCTCTCTGGCTGGTAC

Query= MSMg01no095_h06.g1 MSMg01no095_h06.g1 CHROMAT_FILE:
MSMg01no095_h06.g1 PHD_FILE: MSMg01no095_h06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:29 2005
         (641 letters)



>mm_chr4_4541174_4542214
          Length = 1041

 Score = 1201 bits (621), Expect = 0.0
 Identities = 636/641 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acactaccacaccctggactggagcactctgaccactgatttccacttggtaaagtgtaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acactaccacaccctggactggagcactctgaccactgatttccacttggtaaagtgtaa 260

                                                                       
Query: 61  caaaggacaaagtaaccccatatatgatgaaatggcatccttcccaacgggaaatttgta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaggacaaagtaaccccatatatgatgaaatggcatccttcccaacgggaaatttgta 320

                                                                       
Query: 121 gctatcaaagaaagagccccaccgatggtcatttgcaaaggaggctgctgtacaattgat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctatcaaagaaagagccccaccgatggtcatttgcaaaggaggctgctgtacaattgat 380

                                                                       
Query: 181 ttatgttaaaaagacacttgatatttaaggggaatgaactgtgttcaagtgatagaatta 240
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 ttatgttaaaaagacacttgatatttaaggggaatgaactatgttcaagtgatagaatta 440

                                                                       
Query: 241 actgcacaaataaaaggcacatgtattacttgcagctaaatatcacacagagtatacacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actgcacaaataaaaggcacatgtattacttgcagctaaatatcacacagagtatacacc 500

                                                                       
Query: 301 caagagcgtggctgtaaatgtggtgtgtttcccattagagacagagtcgggacatttgag 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagagtgtggctgtaaatgtggtgtgtttcccattagagacagagtcgggacatttgag 560

                                                                       
Query: 361 gtggccctgtgggtattaaagagttcccacagcagggctctgttctcttctgaaaaccct 420
           |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 561 gtggccctgtgggtattaaagagttcccacagcaggactttgttctcttctgaaaaccct 620

                                                                       
Query: 421 attggcaatgtctccctttgcctggtatctgataatataacactggaactgttcccacta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attggcaatgtctccctttgcctggtatctgataatataacactggaactgttcccacta 680

                                                                       
Query: 481 gatgctcagaggctggctaagtgataaggtcattactcatgttgaatacttgcttcctgc 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 681 gatgctcagaggctggctaagtgataaggtcattactcatgttgaatacttgcttcctcc 740

                                                                       
Query: 541 tgaaagctgggagtttggatgtattccaggcaaagggttttcaagagcaacacctaatgt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgaaagctgggagtttggatgtattccaggcaaagggttttcaagagcaacacctaatgt 800

                                                    
Query: 601 aaatatgggctcacagtctctcatgaacctctctggctggt 641
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaatatgggctcacagtctctcatgaacctctctggctggt 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)