CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGCTCA
ACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCA
CCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGAT
GCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGAT
TGCAGGCTTGTACAACCACTCTGGAGATCAGTCTGGCGGTTCCTCAGAAA
ACTGGATATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATAT
ATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTC
ATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAGGAACCCAGATGCCC
CTCAACAGAGGAATGGATACAGAAGATGTGGTACATCTACACAATGGAGC
ACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTGGCCAAATGG
ATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAA
CTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAACCTAAG
ATACCCAAGATATAAGATACAATTTCCTAAACACATGAAACTCAAGAAAA
ATGAAGACTGAAGTGTGAA

CAATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGGAAATAGAAAGAAAAAAATTGAGGGT
AATCTGTGTCTTTAGAGATTTAACCTTCTATTTGATTCTTTTGAACAATG
AAGTTTTATGACAAATCATGTTTCTTAAAGATTCAGAATATATACATGTG
TGTTAATTATATATATAATGCTGATCATAATGTATTAATTACCATATCTT
ACTTAATTTACTAAGTCTTAAAGAGGCTCAAGAATTCTATTTCTTAAACA
AATAATTTTGACATCCTTTAAATGCAACTGCTTAATTTACATTTTTTTAT
TGATAGTTTCCAACTAGTTATCCACTCTTGGTATTCTTACTTAATAGTGG
CATTTCTTAGCCACTATAATATACACTCAAAGAAGGTACAGAAATCCATT
AAAAATAATGATTATATAAATTGGCTGTTCCTTGAATACATATCAAAACT
TGAAAGCAAGGGGTATCATCTAGACATTTTATTCAGAATTACAAAAAAAC
AGAATAGAATGATTTTGAGGAAATAAAAATGTAGACAATCTAGTAAAGAT
TCACACCAGCTCAACAGACAAGGCAAGGGAATTCTTGTCCTACAAAGCCT
TAGAAGTGTTGTCAGCTATTAGAATTTAAAGGCTGATAGTCATATTAATT
ACACAATGTGGACTGATTC

Query= MSMg01no095_m05.g1 MSMg01no095_m05.g1 CHROMAT_FILE:
MSMg01no095_m05.g1 PHD_FILE: MSMg01no095_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:53 2005
         (600 letters)



>mm_chr4_30119586_30120589
          Length = 1004

 Score = 1079 bits (558), Expect = 0.0
 Identities = 590/602 (98%), Gaps = 4/602 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aggaaatagaaagaaaaaaattgagggtaatctgtgtctttagagatttaaccttctatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 aggaaatagaaagaaaaaaattgagggtaatctgtgtctttagagatttaaccttctatt 743

                                                                       
Query: 61  tgattcttttgaacaatgaagttttatgacaaatcatgtttcttaaagattcagaatata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tgattcttttgaacaatgaagttttatgacaaatcatgtttcttaaagattcagaatata 683

                                                                       
Query: 121 tacatgtgtgttaat--tatatatataatgctgatcataatgtattaattaccatatctt 178
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tacatgtgtgttaattatatatatataatgctgatcataatgtattaattaccatatctt 623

                                                                       
Query: 179 acttaatttactaagtcttaaagaggctcaagaattctatttcttaaacaaataattttg 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 acttaatttactaagtcttaaagaggctcaagaattctatttcttaaacaaataattttg 563

                                                                       
Query: 239 acatcctttaaatgcaactgcttaatttaca--tttttttattgatagtttccaactagt 296
           ||||||||||||||||||||||||||||| |  |||||||||||||||||| ||||||||
Sbjct: 562 acatcctttaaatgcaactgcttaatttaaatttttttttattgatagtttacaactagt 503

                                                                       
Query: 297 tatccactcttggtattcttacttaatagtggcatttcttagccactataatatacactc 356
           ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 502 tatccactcttagtattcttacttaatggtggcatttcttagccactataatatacactc 443

                                                                       
Query: 357 aaagaaggtacagaaatccattaaaaataatgattatataaattggctgttccttgaata 416
           ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 442 aaagaaggtgcagaaatccattaaaaataatgattatataaattggctgtttcttgaata 383

                                                                       
Query: 417 catatcaaaacttgaaagcaaggggtatcatctagacattttattcagaattacaaaaaa 476
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 382 catatcaaaacttgaaagcaaggggtatcatctagacatttcattcagaattacaaaaaa 323

                                                                       
Query: 477 acagaatagaatgattttgaggaaataaaaatgtagacaatctagtaaagattcacacca 536
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 322 acagaatagaatgattttgaggaaatgaaaatgtagacaatctagtaaagattcacacca 263

                                                                       
Query: 537 gctcaacagacaaggcaagggaattcttgtcctacaaagccttagaagtgttgtcagcta 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gctcaacagacaaggcaagggaattcttgtcctacaaagccttagaagtgttgtcagcta 203

             
Query: 597 tt 598
           ||
Sbjct: 202 tt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1004
Length adjustment: 10
Effective length of query: 590
Effective length of database: 994
Effective search space:   586460
Effective search space used:   586460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)