Query= MSMg01no096_a24.b1 MSMg01no096_a24.b1 CHROMAT_FILE:
MSMg01no096_a24.b1 PHD_FILE: MSMg01no096_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:17 2005
(122 letters)
>mm_chr4_44643698_44644218
Length = 521
Score = 221 bits (114), Expect = 2e-62
Identities = 120/122 (98%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 1 caaacaagtcccagagtctattcgacactgtcaactttgttaactctgtcccgtccatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaacaagtcccagagtctattcgacactgtcaactttgttaactctgtcccgtccatca 260
Query: 61 ctcacttcccactgtccaggaaaggctgaagggagctcacatcatgaaaaaaaaaataca 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 ctcacttcccactgtccagtaaaggctgaagggagctcacatcatgaaaaaaaaa-taca 319
Query: 121 ga 122
||
Sbjct: 320 ga 321
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 122
Length of database: 521
Length adjustment: 8
Effective length of query: 114
Effective length of database: 513
Effective search space: 58482
Effective search space used: 58482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no096_a24.g1 MSMg01no096_a24.g1 CHROMAT_FILE:
MSMg01no096_a24.g1 PHD_FILE: MSMg01no096_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:17 2005
(286 letters)
>mm_chr4_44791498_44792185
Length = 688
Score = 518 bits (268), Expect = e-151
Identities = 283/288 (98%), Gaps = 2/288 (0%)
Strand = Plus / Minus
Query: 1 ttatgttctgcttt-aaagctc-aatgtagaaacttacactttggggcttctttgcatat 58
|||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 488 ttatgttctgctttaaaagctcaaatgtagaaacttacactttggggcttctttgcatat 429
Query: 59 atttctcctgataaattacatattcacaaaaatgaacataatcttaagaaatatgcatac 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 atttctcctgataaattacatattcacaaaaatgaacataatcttaagaaatatgcatac 369
Query: 119 aaatatgaagtagacttccaaaaccatgaaatagtgataaagctagccctttttgaaaac 178
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 368 aaatatgaagtagacttccaaaaccatgaaatattgataaagttagccctttttgaaaac 309
Query: 179 tacaaaaatcaaaaaagaaaactttaaacacttatttaacttcctcactttcttgtcagt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tacaaaaatcaaaaaagaaaactttaaacacttatttaacttcctcactttcttgtcagt 249
Query: 239 ttttagtaatagccatttcttaatcaagagaaaaatctctggaaagtt 286
|||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 248 ttttagtaatagtcatttcttaatcaagagaaaaatctctggaaagtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 688
Length adjustment: 9
Effective length of query: 277
Effective length of database: 679
Effective search space: 188083
Effective search space used: 188083
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
