MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-097L01
Chromosome	4 (Build37)
Map Location	43,600,125 - 43,600,366
singlet/doublet	singlet
Overlap gene	1110029E03Rik
Upstream gene	LOC100039331, LOC100039131, LOC100040035, LOC100040048, Il11ra2, LOC665962, LOC545614, 1700008B15Rik, Ccl19, Ccl21b, LOC100039205, LOC433698, BC049635, N28178, Dnajb5, 1700022I11Rik, Vcp, Fancg, Pigo, Stoml2, B230312A22Rik, Unc13b, 4930417M19Rik, Rusc2, 4833436C18Rik, Tesk1, Cd72, Sit1, Rmrp, LOC622404, E130306D19Rik, Car9, Tpm2, Tln1, Creb3, Gba2, LOC100039672
Downstream gene	LOC100040179, Npr2, Spag8, Hint2, Serf2-ps, 4930412F15Rik, Olfr70, Olfr71, LOC100039781, 5430416O09Rik, A630077J23Rik, GA_x5J8B7W5BNN-892919-892147, Olfr159, Olfr29-ps1, Olfr156, LOC100040268, Olfr155, Reck, Glipr2, Ccin, Clta, Gne, LOC100040313, OTTMUSG00000007209, Rnf38, Melk, Pax5
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039331 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039331
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 87 ESTs, 1 Protein

name	LOC100039131 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039131
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 55 ESTs, 5 Proteins

name	LOC100040035 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins

name	LOC100040048 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040048
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 53 ESTs, 1 Protein

name	Il11ra2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16158 MGI:109123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665962 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665962
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC545614 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545614
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 57 ESTs, 1 Protein

name	1700008B15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75445 MGI:1922695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 ESTs

name	Ccl19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24047 MGI:1346316
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccl21b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18829 MGI:1349183
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039205 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039205
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 66 ESTs pseudo : _no_value

name	LOC433698 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433698
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins pseudo : _no_value

name	BC049635 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:277773 MGI:2679716
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	N28178 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230085 MGI:2140712
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnajb5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56323 MGI:1930018
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700022I11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67317 MGI:1914567
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vcp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269523 MGI:99919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fancg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60534 MGI:1926471
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pigo (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56703 MGI:1861452
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stoml2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66592 MGI:1913842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B230312A22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230088 MGI:2441854
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Unc13b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22249 MGI:1342278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930417M19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320571 MGI:2444287
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rusc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100213 MGI:2140371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	4833436C18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329831 MGI:2445194
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tesk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21754 MGI:1201675
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cd72 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12517 MGI:88345
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sit1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54390 MGI:1889342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rmrp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19782 MGI:97937
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC622404 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622404
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E130306D19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230098 MGI:3036286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Car9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230099 MGI:2447188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22004 MGI:98810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tln1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21894 MGI:1099832
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Creb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12913 MGI:99946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gba2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230101 MGI:2654325
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110029E03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242406 MGI:1915956
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039672 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039672
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100040179 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040179
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Npr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230103 MGI:97372
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spag8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433700 MGI:3056295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hint2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68917 MGI:1916167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Serf2-ps (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:20366
definition	note : small EDRK-rich factor 2 pseudogene pseudo : _no_value

name	4930412F15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242408 MGI:2441678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr70 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56014 MGI:1860079
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr71 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56015 MGI:1860080
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039781 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs

name	5430416O09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71406 MGI:1918656
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A630077J23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319973 MGI:2443089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	GA_x5J8B7W5BNN-892919-892147 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:257810
definition	note : olfactory receptor GA_x5J8B7W5BNN-892919-892147 pseudo : _no_value

name	Olfr159 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29849 MGI:1352686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr29-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29848 MGI:1352685
definition	gene_synonym : MOR262-11; mOR37d; MTPCR52; Olfr158; Olfr29; Olfr37d note : olfactory receptor 29, pseudogene 1 pseudo : _no_value

name	Olfr156 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29846 MGI:1352683
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040268 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040268
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2250 Proteins

name	Olfr155 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29845 MGI:1352681
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Reck (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53614 MGI:1855698
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glipr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384009 MGI:1917770
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccin (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:442829 MGI:3045316
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clta (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12757 MGI:894297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	Gne (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50798 MGI:1354951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040313 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040313
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	OTTMUSG00000007209 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623796 MGI:3651567
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 261 ESTs, 8 Proteins

name	Rnf38 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73469 MGI:1920719
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Melk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17279 MGI:106924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pax5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18507 MGI:97489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039331 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252334 GeneID:100039331
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 87 ESTs, 1 Protein product : similar to 4933409K07Rik protein transcript_id : XM_001472494.1

name	LOC100039131 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252324 GeneID:100039131
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 55 ESTs, 5 Proteins product : similar to beta chemokine Exodus-2 transcript_id : XM_001472262.1

name	LOC100040035 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252359 GeneID:100040035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins product : similar to EBI-1 ligand chemokine transcript_id : XM_001473986.1

name	LOC100040048 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252361 GeneID:100040048
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 53 ESTs, 1 Protein product : similar to chemokine (C-C motif) ligand 27 transcript_id : XM_001473998.1

name	Il11ra2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560576 GeneID:16158 MGI:109123
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 11 receptor, alpha chain 2 transcript_id : NM_010550.2

name	LOC665962 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94371725 GeneID:665962
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : similar to CG31439-PA transcript_id : XM_980595.1

name	1700008B15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252330 GeneID:75445 MGI:1922695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 ESTs product : RIKEN cDNA 1700008B15 gene transcript_id : XM_001472421.1

name	Ccl19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10518345 GeneID:24047 MGI:1346316
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-C motif) ligand 19 transcript_id : NM_011888.2

name	Ccl21b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130240 GeneID:18829 MGI:1349183
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-C motif) ligand 21b transcript_id : NM_011124.4

name	BC049635 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375499 GeneID:277773 MGI:2679716
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC049635 transcript_id : NM_177785.3

name	N28178 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476176 GeneID:230085 MGI:2140712
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence N28178 transcript_id : NM_172690.2

name	Dnajb5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254371 GeneID:56323 MGI:1930018
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily B, member 5 transcript_id : NM_019874.3

name	1700022I11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803396 GeneID:67317 MGI:1914567
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700022I11 gene transcript_id : NM_026088.2

name	Vcp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369659 GeneID:269523 MGI:99919
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : valosin containing protein transcript_id : NM_009503.3

name	Fancg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716362 GeneID:60534 MGI:1926471
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fanconi anemia, complementation group G transcript_id : NM_053081.1

name	Pigo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9910491 GeneID:56703 MGI:1861452
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol glycan anchor biosynthesis, class O transcript_id : NM_020035.1

name	Stoml2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981247 GeneID:66592 MGI:1913842
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stomatin (Epb7.2)-like 2 transcript_id : NM_023231.2

name	B230312A22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803417 GeneID:230088 MGI:2441854
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230312A22 gene transcript_id : NM_172691.2

name	Unc13b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487232 GeneID:22249 MGI:1342278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : unc-13 homolog B (C. elegans) transcript_id : NM_001081413.1

name	4930417M19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126366050 GeneID:320571 MGI:2444287
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930417M19 gene transcript_id : NM_177195.3

name	Rusc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83641886 GeneID:100213 MGI:2140371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RUN and SH3 domain containing 2 transcript_id : NM_001037709.1

name	Rusc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83641888 GeneID:100213 MGI:2140371
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RUN and SH3 domain containing 2 transcript_id : NM_199057.2

name	4833436C18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383707 GeneID:329831 MGI:2445194
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4833436C18 gene transcript_id : NM_177377.3

name	Tesk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543856 GeneID:21754 MGI:1201675
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis specific protein kinase 1 transcript_id : NM_011571.2

name	Cd72 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680889 GeneID:12517 MGI:88345
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD72 antigen transcript_id : NM_007654.1

name	Sit1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802022 GeneID:54390 MGI:1889342
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : suppression inducing transmembrane adaptor 1 transcript_id : NM_019436.2

name	LOC622404 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:85702295 GeneID:622404
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC622404 transcript_id : NM_001037913.1

name	E130306D19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701437 GeneID:230098 MGI:3036286
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E130306D19 gene transcript_id : NM_001013377.1

name	Car9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:145046219 GeneID:230099 MGI:2447188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonic anhydrase 9 transcript_id : NM_139305.2

name	Tpm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892876 GeneID:22004 MGI:98810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tropomyosin 2, beta transcript_id : NM_009416.3

name	Tln1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76253947 GeneID:21894 MGI:1099832
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : talin 1 transcript_id : NM_011602.4

name	Creb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801684 GeneID:12913 MGI:99946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cAMP responsive element binding protein 3 transcript_id : NM_013497.3

name	Gba2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381461 GeneID:230101 MGI:2654325
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucosidase beta 2 transcript_id : NM_172692.2

name	1110029E03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922687 GeneID:242406 MGI:1915956
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110029E03 gene transcript_id : NM_172866.3

name	LOC100039672 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252339 GeneID:100039672
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100039672 transcript_id : XM_001473471.1

name	LOC100040179 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252366 GeneID:100040179
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to HBxAg transactivated protein 2 transcript_id : XM_001474227.1

name	Npr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129825 GeneID:230103 MGI:97372
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : natriuretic peptide receptor 2 transcript_id : NM_173788.3

name	Spag8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55925584 GeneID:433700 MGI:3056295
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm associated antigen 8 transcript_id : NM_001007463.1

name	Hint2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625718 GeneID:68917 MGI:1916167
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : histidine triad nucleotide binding protein 2 transcript_id : NM_026871.1

name	4930412F15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364998 GeneID:242408 MGI:2441678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930412F15 gene transcript_id : NM_175517.3

name	Olfr70 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11464982 GeneID:56014 MGI:1860079
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 70 transcript_id : NM_019485.1

name	Olfr71 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11464984 GeneID:56015 MGI:1860080
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 71 transcript_id : NM_019486.1

name	LOC100039781 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252341 GeneID:100039781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs product : hypothetical protein LOC100039781 transcript_id : XM_001473603.1

name	5430416O09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383529 GeneID:71406 MGI:1918656
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5430416O09 gene transcript_id : NM_027789.3

name	A630077J23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94371743 GeneID:319973 MGI:2443089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA A630077J23 gene transcript_id : XM_981990.1

name	Olfr159 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11464980 GeneID:29849 MGI:1352686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 159 transcript_id : NM_019476.1

name	Olfr156 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11276076 GeneID:29846 MGI:1352683
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 156 transcript_id : NM_019474.1

name	LOC100040268 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252368 GeneID:100040268
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2250 Proteins product : similar to olfactory receptor transcript_id : XM_001474382.1

name	Olfr155 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11276074 GeneID:29845 MGI:1352681
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 155 transcript_id : NM_019473.1

name	Reck (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7710063 GeneID:53614 MGI:1855698
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reversion-inducing-cysteine-rich protein with kazal motifs transcript_id : NM_016678.1

name	Glipr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130367 GeneID:384009 MGI:1917770
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GLI pathogenesis-related 2 transcript_id : NM_027450.3

name	Ccin (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803074 GeneID:442829 MGI:3045316
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calicin transcript_id : NM_001002787.2

name	Clta (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122939193 GeneID:12757 MGI:894297
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : clathrin, light polypeptide (Lca) transcript_id : NM_001080385.1

name	Clta (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122939197 GeneID:12757 MGI:894297
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : clathrin, light polypeptide (Lca) transcript_id : NM_016760.2

name	Clta (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122939191 GeneID:12757 MGI:894297
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : clathrin, light polypeptide (Lca) transcript_id : NM_001080384.1

name	Clta (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122939195 GeneID:12757 MGI:894297
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : clathrin, light polypeptide (Lca) transcript_id : NM_001080386.1

name	Gne (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980684 GeneID:50798 MGI:1354951
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucosamine transcript_id : NM_015828.2

name	LOC100040313 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252372 GeneID:100040313
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040313 transcript_id : XM_001474487.1

name	OTTMUSG00000007209 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252345 GeneID:623796 MGI:3651567
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 261 ESTs, 8 Proteins product : predicted gene, OTTMUSG00000007209 transcript_id : XM_888292.3

name	Rnf38 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363897 GeneID:73469 MGI:1920719
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 38 transcript_id : NM_001038993.2

name	Rnf38 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129864 GeneID:73469 MGI:1920719
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 38 transcript_id : NM_175201.4

name	Melk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981625 GeneID:17279 MGI:106924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : maternal embryonic leucine zipper kinase transcript_id : NM_010790.2

name	Pax5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130642 GeneID:18507 MGI:97489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired box gene 5 transcript_id : NM_008782.2

name	LOC100039331 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252335 GeneID:100039331
definition	codon_start : 1 product : similar to 4933409K07Rik protein protein_id : XP_001472544.1

name	LOC100039131 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252325 GeneID:100039131
definition	codon_start : 1 product : similar to beta chemokine Exodus-2 protein_id : XP_001472312.1

name	LOC100040035 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252360 GeneID:100040035
definition	codon_start : 1 product : similar to EBI-1 ligand chemokine protein_id : XP_001474036.1

name	LOC100040048 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252362 GeneID:100040048
definition	codon_start : 1 product : similar to chemokine (C-C motif) ligand 27 protein_id : XP_001474048.1

name	Il11ra2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560577 CCDS:CCDS18078.1 GeneID:16158 MGI:109123
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0004907 - interleukin receptor activity [Evidence IEA]; GO:0004921 - interleukin-11 receptor activity [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : locus 2 product : interleukin 11 receptor, alpha chain 2 protein_id : NP_034680.2

name	LOC665962 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94371726 GeneID:665962
definition	codon_start : 1 product : hypothetical protein protein_id : XP_985689.1

name	1700008B15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252331 GeneID:75445 MGI:1922695
definition	codon_start : 1 product : hypothetical protein LOC75445 protein_id : XP_001472471.1

name	Ccl19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755422 CCDS:CCDS18080.1 GeneID:24047 MGI:1346316
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA] codon_start : 1 function : strongly attracts lymphocytes note : small inducible cytokine A19; EBI-1 ligand chemokine; EBV-induced molecule 1 ligand chemokine; chemokine CCL19; attracts mature dendritic cells and naive T cells product : chemokine (C-C motif) ligand 19 protein_id : NP_036018.1

name	Ccl21b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14547891 CCDS:CCDS18081.1 GeneID:18829 MGI:1349183
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0050930 - induction of positive chemotaxis [Evidence IDA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0048535 - lymph node development [Evidence IMP] codon_start : 1 note : small inducible cytokine A21b; exodus-2; chemokine (C-C motif) ligand 21b (serine) product : chemokine (C-C motif) ligand 21a (serine) protein_id : NP_035254.1

name	BC049635 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244306 CCDS:CCDS18082.1 GeneID:277773 MGI:2679716
definition	codon_start : 1 product : hypothetical protein LOC277773 protein_id : NP_808453.1

name	N28178 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369996 CCDS:CCDS18083.1 GeneID:230085 MGI:2140712
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC230085 protein_id : NP_766278.1

name	Dnajb5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9845259 CCDS:CCDS18084.1 GeneID:56323 MGI:1930018
definition	GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence ISS] [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : heat shock protein hsp40-3; DnaJ (Hsp40) homolog subfamily B member 5 product : DnaJ (Hsp40) homolog, subfamily B, member 5 protein_id : NP_063927.1

name	1700022I11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74315979 GeneID:67317 MGI:1914567
definition	codon_start : 1 product : hypothetical protein LOC67317 protein_id : NP_080364.1

name	Vcp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30023842 CCDS:CCDS18086.1 GeneID:269523 MGI:99919
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS] [Evidence IEA]; GO:0005792 - microsome [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence ISS] [Evidence IEA]; GO:0016887 - ATPase activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0006919 - caspase activation [Evidence IDA]; GO:0030433 - ER-associated protein catabolism [Evidence ISS]; GO:0045184 - establishment of protein localization [Evidence ISS]; GO:0016567 - protein ubiquitination [Evidence ISS]; GO:0030970 - retrograde protein transport, ER to cytosol [Evidence ISS]; GO:0006810 - transport [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0030968 - unfolded protein response [Evidence ISS] codon_start : 1 exception : mismatches in translation note : transitional endoplasmic reticulum ATPase; homolog of yeast cdc48 product : valosin containing protein protein_id : NP_033529.2

name	Fancg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716363 CCDS:CCDS18087.1 GeneID:60534 MGI:1926471
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0001541 - ovarian follicle development [Evidence IMP]; GO:0006974 - response to DNA damage stimulus [Evidence IMP]; GO:0009314 - response to radiation [Evidence IMP]; GO:0007286 - spermatid development [Evidence IMP] codon_start : 1 function : putative DNA repair protein note : Fanconi anemia complementation group G product : Fanconi anemia, complementation group G protein_id : NP_444311.1

name	Pigo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910492 CCDS:CCDS18088.1 GeneID:56703 MGI:1861452
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005789 - endoplasmic reticulum membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence TAS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006506 - GPI anchor biosynthesis [Evidence IDA] [Evidence IEA]; GO:0009117 - nucleotide metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : phosphatidylinositol glycan, class O protein_id : NP_064419.1

name	Stoml2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963591 CCDS:CCDS18089.1 GeneID:66592 MGI:1913842
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : stomatin-like protein 2 protein_id : NP_075720.1

name	B230312A22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370006 CCDS:CCDS18090.1 GeneID:230088 MGI:2441854
definition	codon_start : 1 product : hypothetical protein LOC230088 protein_id : NP_766279.1

name	Unc13b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487233 GeneID:22249 MGI:1342278
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0045202 - synapse [Evidence IEA]; GO:0019717 - synaptosome [Evidence IEA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0001566 - non-kinase phorbol ester receptor activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IMP]; GO:0016082 - synaptic vesicle priming [Evidence IMP] codon_start : 1 note : unc13 homolog 1; unc-13 homolog A product : unc-13 homolog B protein_id : NP_001074882.1

name	4930417M19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126366051 CCDS:CCDS18091.1 GeneID:320571 MGI:2444287
definition	GO_function : GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA] codon_start : 1 product : testis flippase protein_id : NP_796169.2

name	Rusc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83641887 CCDS:CCDS18092.1 GeneID:100213 MGI:2140371
definition	codon_start : 1 product : RUN and SH3 domain containing 2 protein_id : NP_001032798.1

name	Rusc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83641889 CCDS:CCDS18092.1 GeneID:100213 MGI:2140371
definition	codon_start : 1 product : RUN and SH3 domain containing 2 protein_id : NP_951012.2

name	4833436C18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893535 GeneID:329831 MGI:2445194
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC329831 protein_id : NP_796351.1

name	Tesk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543857 CCDS:CCDS18094.1 GeneID:21754 MGI:1201675
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : testis specific protein kinase 1 protein_id : NP_035701.2

name	Cd72 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680890 GeneID:12517 MGI:88345
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0005529 - sugar binding [Evidence IEA] GO_process : GO:0006952 - defense response [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : CD72 antigen protein_id : NP_031680.1

name	Sit1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9507101 CCDS:CCDS18096.1 GeneID:54390 MGI:1889342
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 exception : mismatches in translation note : SHP2 interacting transmembrane adaptor protein product : SHP2-interacting transmembrane adaptor protein protein_id : NP_062309.1

name	LOC622404 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:85702296 CCDS:CCDS18097.1 GeneID:622404
definition	codon_start : 1 product : hypothetical protein LOC622404 protein_id : NP_001033002.1

name	E130306D19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701438 CCDS:CCDS18098.1 GeneID:230098 MGI:3036286
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC230098 protein_id : NP_001013395.1

name	Car9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:145046220 CCDS:CCDS18099.1 GeneID:230099 MGI:2447188
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0002009 - morphogenesis of an epithelium [Evidence IMP]; GO:0046903 - secretion [Evidence IMP] codon_start : 1 product : carbonic anhydrase 9 protein_id : NP_647466.2

name	Tpm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11875203 CCDS:CCDS18100.1 GeneID:22004 MGI:98810
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005862 - muscle thin filament tropomyosin [Evidence TAS] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005200 - structural constituent of cytoskeleton [Evidence TAS] GO_process : GO:0006936 - muscle contraction [Evidence TAS] codon_start : 1 product : tropomyosin 2, beta protein_id : NP_033442.2

name	Tln1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755809 CCDS:CCDS18101.1 GeneID:21894 MGI:1099832
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005829 - cytosol [Evidence ISS]; GO:0005925 - focal adhesion [Evidence IDA] [Evidence ISS]; GO:0001726 - ruffle [Evidence ISS] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007044 - cell-substrate junction assembly [Evidence IMP]; GO:0030866 - cortical actin cytoskeleton organization and biogenesis [Evidence IMP] codon_start : 1 exception : mismatches in translation product : talin 1 protein_id : NP_035732.1

name	Creb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625639 CCDS:CCDS18102.1 GeneID:12913 MGI:99946
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : cAMP responsive element binding protein 3 protein_id : NP_038525.2

name	Gba2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370000 CCDS:CCDS18103.1 GeneID:230101 MGI:2654325
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence ISS]; GO:0005792 - microsome [Evidence ISS]; GO:0005790 - smooth endoplasmic reticulum [Evidence ISS] GO_function : GO:0008422 - beta-glucosidase activity [Evidence ISS]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008206 - bile acid metabolism [Evidence ISS]; GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : bile acid; glucosidase, beta (bile acid) 2 product : bile acid beta-glucosidase protein_id : NP_766280.1

name	1110029E03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370314 GeneID:242406 MGI:1915956
definition	codon_start : 1 product : hypothetical protein LOC242406 protein_id : NP_766454.1

name	LOC100039672 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252340 GeneID:100039672
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473521.1

name	LOC100040179 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252367 GeneID:100040179
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474277.1

name	Npr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28916675 CCDS:CCDS18105.1 GeneID:230103 MGI:97372
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004383 - guanylate cyclase activity [Evidence IDA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0016829 - lyase activity [Evidence IEA]; GO:0016941 - natriuretic peptide receptor activity [Evidence IDA]; GO:0008528 - peptide receptor activity, G-protein coupled [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006182 - cGMP biosynthesis [Evidence IDA]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : Nppb receptor; guanylyl cyclase-B; achondroplasia; natriuretic peptide receptor B type product : natriuretic peptide receptor 2 protein_id : NP_776149.1

name	Spag8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55925585 GeneID:433700 MGI:3056295
definition	GO_component : GO:0001669 - acrosome [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : sperm associated antigen 8-like protein product : sperm associated antigen 8 protein_id : NP_001007464.1

name	Hint2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625719 CCDS:CCDS18106.1 GeneID:68917 MGI:1916167
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 product : histidine triad nucleotide binding protein 2 protein_id : NP_081147.1

name	4930412F15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425280 CCDS:CCDS18107.1 GeneID:242408 MGI:2441678
definition	codon_start : 1 product : hypothetical protein LOC242408 protein_id : NP_780726.1

name	Olfr70 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11464983 GeneID:56014 MGI:1860079
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence ISS] [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence ISS] [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : GA_x6K02T2N78B-16239704-16240654; olfactory receptor MOR262-10 product : olfactory receptor 70 protein_id : NP_062358.1

name	Olfr71 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11464985 CCDS:CCDS18110.1 GeneID:56015 MGI:1860080
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence ISS] [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence ISS] [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2N78B-16230286-16231224; olfactory receptor MOR262-4 product : olfactory receptor 71 protein_id : NP_062359.1

name	LOC100039781 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252342 GeneID:100039781
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473653.1

name	5430416O09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313348 GeneID:71406 MGI:1918656
definition	codon_start : 1 product : hypothetical protein LOC71406 protein_id : NP_082065.1

name	A630077J23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94371744 GeneID:319973 MGI:2443089
definition	codon_start : 1 product : hypothetical protein LOC319973 protein_id : XP_987084.1

name	Olfr159 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11464981 CCDS:CCDS18112.1 GeneID:29849 MGI:1352686
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence ISS] [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence ISS] [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : olfactory receptor 37e; GA_x6K02T2N78B-16165641-16166600; olfactory receptor MOR262-5 product : olfactory receptor 159 protein_id : NP_062349.1

name	Olfr156 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11276077 CCDS:CCDS18113.1 GeneID:29846 MGI:1352683
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence ISS] [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence ISS] [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : olfactory receptor 37b; GA_x6K02T2N78B-16125144-16126100; olfactory receptor MOR262-6 product : olfactory receptor 156 protein_id : NP_062347.1

name	LOC100040268 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252369 GeneID:100040268
definition	codon_start : 1 product : similar to olfactory receptor protein_id : XP_001474432.1

name	Olfr155 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11276075 CCDS:CCDS18115.1 GeneID:29845 MGI:1352681
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence ISS] [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence ISS] [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : olfactory receptor 37a; GA_x6K02T2N78B-16092200-16091241 product : olfactory receptor 155 protein_id : NP_062346.1

name	Reck (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710064 CCDS:CCDS18116.1 GeneID:53614 MGI:1855698
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0000300 - peripheral to membrane of membrane fraction [Evidence ISS] GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence ISS] [Evidence IDA]; GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0001955 - blood vessel maturation [Evidence IGI] [Evidence IMP]; GO:0007049 - cell cycle [Evidence IEA]; GO:0030198 - extracellular matrix organization and biogenesis [Evidence IMP]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation note : membrane-anchored glycoprotein RECK; suppression of tumorigenicity 15 (reversion-inducing-cysteine-rich protein with kazal motifs) product : reversion-inducing-cysteine-rich protein with kazal motifs protein_id : NP_057887.1

name	Glipr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059151 CCDS:CCDS18117.1 GeneID:384009 MGI:1917770
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : GLI pathogenesis-related 2 protein_id : NP_081726.1

name	Ccin (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50582595 CCDS:CCDS18118.1 GeneID:442829 MGI:3045316
definition	GO_component : GO:0005856 - cytoskeleton [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : novel protein containing BTB/POZ and Kelch motif domains (probable ortholog of human calicin (CCIN)) product : calicin protein_id : NP_001002787.1

name	Clta (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:122939194 GeneID:12757 MGI:894297
definition	GO_component : GO:0030125 - clathrin vesicle coat [Evidence IEA]; GO:0005905 - coated pit [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; clathrin light polypeptide (Lca) product : clathrin, light polypeptide (Lca) isoform b protein_id : NP_001073854.1

name	Clta (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:122939198 GeneID:12757 MGI:894297
definition	GO_component : GO:0030125 - clathrin vesicle coat [Evidence IEA]; GO:0005905 - coated pit [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant 3; clathrin light polypeptide (Lca) product : clathrin, light polypeptide (Lca) isoform c protein_id : NP_058040.2

name	Clta (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:122939192 GeneID:12757 MGI:894297
definition	GO_component : GO:0030125 - clathrin vesicle coat [Evidence IEA]; GO:0005905 - coated pit [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; clathrin light polypeptide (Lca) product : clathrin, light polypeptide (Lca) isoform a protein_id : NP_001073853.1

name	Clta (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:122939196 GeneID:12757 MGI:894297
definition	GO_component : GO:0030125 - clathrin vesicle coat [Evidence IEA]; GO:0005905 - coated pit [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 note : isoform d is encoded by transcript variant 4; clathrin light polypeptide (Lca) product : clathrin, light polypeptide (Lca) isoform d protein_id : NP_001073855.1

name	Gne (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980685 CCDS:CCDS18120.1 GeneID:50798 MGI:1354951
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence ISS]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0009384 - N-acylmannosamine kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA] GO_process : GO:0009103 - lipopolysaccharide biosynthesis [Evidence IEA]; GO:0006054 - N-acetylneuraminate metabolism [Evidence TAS]; GO:0006047 - UDP-N-acetylglucosamine metabolism [Evidence IEA] codon_start : 1 note : UDP-N-acetylglucosamine-2-epimerase/N- acetylmannosamine kinase product : glucosamine protein_id : NP_056643.2

name	LOC100040313 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252373 GeneID:100040313
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474537.1

name	OTTMUSG00000007209 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82893172 GeneID:623796 MGI:3651567
definition	codon_start : 1 product : hypothetical protein protein_id : XP_893385.1

name	Rnf38 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84781711 CCDS:CCDS18122.1 GeneID:73469 MGI:1920719
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : ring finger protein 38 isoform 1 protein_id : NP_780410.2

name	Rnf38 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84781709 CCDS:CCDS18123.1 GeneID:73469 MGI:1920719
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : ring finger protein 38 isoform 2 protein_id : NP_001034082.1

name	Melk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981626 CCDS:CCDS18124.1 GeneID:17279 MGI:106924
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : maternal embryonic leucine zipper kinase protein_id : NP_034920.2

name	Pax5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679213 CCDS:CCDS18125.1 GeneID:18507 MGI:97489
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence TAS] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence TAS]; GO:0016564 - transcriptional repressor activity [Evidence TAS] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0007283 - spermatogenesis [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : paired box gene 5 protein_id : NP_032808.1

name	LOC433698 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:433698
definition	number : 4 pseudo : _no_value

name	LOC433698 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:433698
definition	number : 3 pseudo : _no_value

name	LOC433698 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:433698
definition	number : 2 pseudo : _no_value

name	LOC433698 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:433698
definition	number : 1 pseudo : _no_value

name	LOC545614 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252338 GeneID:545614
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 57 ESTs, 1 Protein product : similar to 4933409K07Rik protein transcript_id : XR_001565.2

name	LOC100039205 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252328 GeneID:100039205
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 66 ESTs product : similar to 4933409K07Rik protein pseudo : _no_value transcript_id : XR_030661.1

name	Rmrp (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:32526884 GeneID:19782 MGI:97937
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA component of mitochondrial RNAase P transcript_id : NR_001460.1

clone name	MSMg01-076H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071B08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-097L01.T7 (MSMg01no097_l01.b1)	MSMg01-097L01.TJ (MSMg01no097_l01.g1)
ACC	AG314058	AG314059
length	898	738
length of high quality (start - end)	---	242 (183 - 424)
definition	CHROMAT_FILE: MSMg01no097_l01.b1 PHD_FILE: MSMg01no097_l01.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:54:31 2005	CHROMAT_FILE: MSMg01no097_l01.g1 PHD_FILE: MSMg01no097_l01.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:54:31 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	GTCGGGGGTGGATTGTGGCCTNCTGTTGTTTTTTTTTCAACGCACTTCTC CTTCTCTTTTTCGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTC GAAGAGGAGGCGNGGAATTCCAGGTTTTCCCGAACAATTTAGNGAGACCC TGTTCCAAAAAGCAGAAGAAAAACAACATAACATAAACTAAATTTAAATA CTCACGAGTTATTTAATGCTTCGCCGGTCGAATGCTGAGGCAGAGGCAGA GAGCTGACCCAGAGGCTTGTATGCCGAGGCCATATTACCGATACCTAGCA ACCAGGCAGATTACAGAGTCTAGACGCCCGATTTAGAGGGCGAGGTTAGA GCGAAGAGGCACTGTTTATATCCCGTGACGATATTGGCTTACACCCGATT TTTCAGTAGCCGAGTTGACGGTACAGCCTTGAGATCCTACCCCCGAATTT CTCGCTCTTGTCCCACTATTCCCCCGCCCCATCTTATACTGTACCCATTT ACTCCTCGCACCCACCGAAACGTTCAAAACCCGAAATGACGTCGACCATC ATTGTCCTACCTCAATGTTATTCATACACTCGTAAGCAACGCTTATTATC AGAATGTTTACAAACGCACTGTTGCCAACACCACTATAACACGACGCGCA CCCCCGCCTCTCACCCGTAATAGCACGTTCCCAAACTGTTAATAAAACCC GCACATATTCCATACCTATTCACTGCTCCCGCTCCATTATATCAGATACA GCGCACGAATCTCAACTCCAAGAACTCTCCTTTATACAAAATTTTGAACT CTATTAATGGCGTTATCGGCCACGCGAGAACTTTCTTTGATACCCCCACC CCATTGATAGGAGCTCTGACAAATCGTTACTCCGGCTCCCGCCCCCCG	NNNNNNNNCAATTTTTTTTTCCCTTTCTTTTTATTTATACCCCCCCCTCC TGGGCGNAACCTCTATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXTTTCTCCGAAATTCTCAGGTAAACTGGAACC ACGTTGGCCTGTGACCATAAAGATAGTGGATGGTGTAAGAAGAAGGTTCC CTGTGTCTTCTATGGAACCCAGCCTGCCATCCAGTACCCCATTCTCAGGT CCCCAAAGGAAGGCTGATAGGGCTGTTTCCATATAACCATCCCAACACTG AGAAACAGGAGGGTTCCCCTAGTGTGGTGACCACCTTGGGCTACAGAGTG AGACCCTATTTTAAAAACAATTTCCTCTTACTGAATCTTAAAATCTTGAA TAAAGATTGAAAATCAATGTTAAGCGCCTAATTTAAAACCCAAACTTAGG TCGCTAAGATTAGTTTTATGGGGCTTGACAAGATGACAGGGTTTAAGAGC ACTTGACTCCCAGCAGTACCTCTGGAACAACATGTGTTTTTCCCTAACCA TCCATTCAGTACCAGGGCATCTGACGTCCTTTTCTGATGTGGAGCACCCG GCACACATTTGCCGTATATAGAAACCCGCATGTAAATACTTATACCCATG AGCATACCTTAAAACTTTTTACAAGATCGATCCTGTGATCAAACGCAGTG GCTCCCGCCTGTAACCTCTGCACATGTTATGTGCAGTA
quality values	Open. Hide. 9 9 9 9 9 6 6 6 6 6 6 8 8 8 10 10 10 8 8 8 3 0 3 9 8 8 8 9 9 11 11 10 11 11 8 11 8 8 7 9 9 9 8 8 8 8 6 10 6 6 8 8 10 10 11 18 19 30 30 13 15 10 8 8 8 10 10 10 9 15 12 9 9 9 20 23 25 21 18 15 18 23 23 20 12 12 12 18 18 19 19 19 22 19 19 9 11 8 7 7 7 8 7 10 10 12 12 12 11 12 12 3 0 3 17 19 23 23 22 13 8 8 8 8 8 8 8 9 9 9 9 9 9 9 19 19 24 22 21 18 15 3 0 3 10 10 10 17 20 14 14 14 21 17 18 17 15 15 17 23 12 15 15 12 12 11 15 15 11 12 12 10 11 11 11 12 16 11 9 10 10 10 10 10 8 8 8 8 8 8 15 24 20 16 16 18 17 12 15 14 10 10 8 8 11 11 24 26 27 15 14 14 12 12 11 8 8 6 6 8 8 8 8 8 8 8 8 8 9 9 9 9 11 10 10 10 10 12 17 22 11 11 11 12 15 12 11 11 11 8 8 6 6 8 8 11 12 10 10 10 11 11 11 9 9 8 6 6 6 8 6 8 6 7 8 8 10 11 8 6 6 6 8 8 9 10 8 8 6 6 8 8 10 12 10 10 10 10 11 10 8 8 6 6 8 10 10 8 8 8 8 8 6 6 8 6 8 8 8 8 10 10 8 8 11 11 10 8 6 6 8 8 8 8 9 9 10 12 11 11 11 16 22 15 8 8 8 8 8 8 8 13 10 8 8 8 9 9 8 8 6 6 6 6 8 8 8 11 9 9 9 11 10 12 12 10 10 8 8 8 8 8 8 10 8 10 10 10 8 8 8 6 6 10 8 9 9 10 10 10 12 10 9 9 6 6 6 6 8 8 8 8 10 10 10 10 10 10 8 8 6 6 6 6 9 8 10 10 8 8 8 8 8 6 6 8 8 8 6 7 8 8 8 8 8 8 8 8 8 10 13 10 10 8 8 8 8 9 17 15 9 9 9 9 12 11 10 8 8 8 8 12 11 17 11 8 8 8 7 7 9 10 10 13 13 12 9 9 9 12 10 10 10 10 11 11 11 12 10 8 8 8 10 10 10 8 8 8 8 8 9 6 6 7 7 12 9 9 11 6 6 8 6 8 8 9 8 8 6 6 8 8 8 8 8 6 8 8 8 7 7 8 8 10 15 10 11 11 11 15 13 12 12 9 7 10 8 11 11 10 10 10 9 9 10 11 12 8 8 8 8 10 8 8 8 8 6 7 8 8 10 9 9 9 9 8 8 10 7 9 11 10 10 10 10 10 8 8 8 7 6 9 8 10 8 8 8 8 8 9 9 8 8 8 8 8 6 6 8 8 10 8 8 8 8 8 8 6 6 8 6 8 6 6 8 6 8 8 8 8 6 6 6 8 8 8 8 6 6 6 6 6 6 10 8 6 6 8 6 7 8 6 6 8 6 9 9 9 9 10 10 10 11 13 13 11 11 10 10 7 14 6 6 8 6 6 8 8 10 6 6 6 6 8 8 8 6 6 8 6 6 6 8 8 6 6 6 10 8 11 11 8 8 6 6 8 10 8 8 8 8 11 9 11 11 11 10 10 10 10 8 6 6 6 8 8 6 6 6 8 8 17 10 8 8 8 8 8 8 8 8 8 7 7 6 6 8 8 8 6 6 8 6 6 8 8 9 9 10 8 9 7 11 9 9 11 9 9 10 8 8 8 6 6 8 6 6 8 10 20 14 14 12 12 12 18 9 9 8 8 8 8 10 10 10 10 9 12 10 10 10 10 9 8 8 8 8 7 9 6 6 6 6 6 8 8 10 11 6 9 9 8 8 8 9 9 10 10 7 6 6 6 8 10 10 6 6 6 7 10 8 15 12 8 8 6 6 8 8 8 6 6 8 8 8 6 6 8 6 7 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 11 6 6 6 6 6 13 18 17 9 9 9	Open. Hide. 0 0 0 0 0 0 0 0 3 7 7 6 6 6 9 9 9 9 9 9 9 9 6 8 8 17 11 22 23 29 34 21 11 6 6 6 7 6 6 6 7 6 6 8 10 9 11 12 19 11 8 8 8 8 8 3 0 3 18 18 7 7 7 7 7 10 10 10 8 8 8 8 8 8 9 10 12 14 25 37 32 33 33 33 37 37 37 37 30 23 13 13 7 7 7 9 12 12 12 11 12 15 10 11 10 15 27 26 26 15 15 15 27 27 47 26 22 12 12 6 6 6 6 6 6 13 15 10 10 17 17 24 24 37 37 37 39 47 57 41 41 32 31 31 23 23 23 31 28 36 35 42 43 47 47 43 30 29 24 30 32 33 33 34 42 42 46 37 36 28 17 18 19 23 22 18 28 19 19 14 26 19 18 23 28 32 32 28 28 28 37 36 37 37 35 30 36 32 37 43 42 47 42 47 47 57 47 59 43 44 44 44 44 43 43 43 43 43 43 43 23 23 23 43 44 42 33 33 35 37 43 37 43 32 43 37 43 43 52 52 52 52 43 43 32 38 27 43 43 52 36 38 27 20 20 32 36 57 45 45 42 42 35 33 33 43 43 43 33 33 33 33 29 35 39 44 59 43 43 35 43 43 57 43 43 35 35 35 43 43 57 57 57 43 39 39 31 31 24 36 36 43 43 43 43 52 43 43 36 22 22 12 12 11 15 24 38 43 43 43 35 35 35 43 39 23 27 23 33 38 28 19 11 11 11 27 28 18 14 17 17 32 36 36 32 33 24 24 13 14 14 21 21 32 36 35 35 35 43 43 43 43 43 52 52 44 44 32 32 32 27 19 9 9 9 11 18 32 32 18 20 20 32 28 29 44 44 43 42 31 31 35 42 32 42 35 35 27 21 15 15 14 15 15 17 18 24 24 32 28 28 30 24 24 18 17 17 30 30 36 28 24 15 12 12 12 15 15 28 20 23 22 24 28 23 28 28 41 41 41 35 33 33 28 28 18 23 11 12 21 19 21 24 28 16 16 11 11 11 25 30 35 35 31 30 30 32 28 24 15 10 9 9 9 10 10 23 12 15 19 11 11 11 18 18 15 15 15 19 15 18 17 24 22 17 13 11 11 16 18 28 28 37 36 39 28 33 28 30 19 22 13 22 19 18 14 14 21 26 26 31 28 28 24 20 19 19 19 15 18 15 11 11 12 21 15 20 20 23 14 14 16 17 14 19 19 23 24 18 24 12 12 12 15 12 12 11 11 20 20 16 16 17 24 24 32 25 19 17 16 12 10 10 10 10 10 10 12 12 21 24 37 37 36 32 35 31 31 22 16 13 11 11 13 17 18 11 11 12 18 12 8 8 8 8 10 10 15 11 11 9 9 9 10 12 12 8 8 8 8 8 8 8 8 10 10 10 8 9 12 15 16 11 11 11 12 12 12 22 23 19 11 11 12 12 15 20 22 18 20 11 11 10 10 11 9 9 10 9 9 8 8 8 8 8 9 11 20 19 21 10 10 10 10 10 10 10 10 7 7 8 8 8 10 9 10 8 10 10 8 8 8 11 11 11 11 9 9 9 9 8 8 10 8 8 8 8 8 10 10 8 10 9 11 11 12 10 10 8 8 8 8 8 8 8 8 8 11 12 13 10 10 9 9 9 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no097_l01.g1 MSMg01no097_l01.g1 CHROMAT_FILE:
MSMg01no097_l01.g1 PHD_FILE: MSMg01no097_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:31 2005
         (242 letters)



>mm_chr4_43599925_43600566
          Length = 642

 Score =  445 bits (230), Expect = e-129
 Identities = 239/242 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgtaagaagaaggttccctgtgtcttctatggaacccagcctgccatccagtaccccat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 201 gtgtaagaagaaggttccctgtgtcttctatggaacccagcctgccatccagtaccccac 260

                                                                       
Query: 61  tctcaggtccccaaaggaaggctgatagggctgtttccatataaccatcccaacactgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcaggtccccaaaggaaggctgatagggctgtttccatataaccatcccaacactgag 320

                                                                       
Query: 121 aaacaggagggttcccctagtgtggtgaccaccttgggctacagagtgagaccctatttt 180
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 aaacaggagggttcccctagtgtggtgaccagcttgggctacagagtgagaccctatttt 380

                                                                       
Query: 181 aaaaacaatttcctcttactgaatcttaaaatcttgaataaagattgaaaatcaatgtta 240
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaacaatttgctcttactgaatcttaaaatcttgaataaagattgaaaatcaatgtta 440

             
Query: 241 ag 242
           ||
Sbjct: 441 ag 442


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space:   147489
Effective search space used:   147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information