Query= MSMg01no097_p05.b1 MSMg01no097_p05.b1 CHROMAT_FILE:
MSMg01no097_p05.b1 PHD_FILE: MSMg01no097_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:53 2005
(433 letters)
>mm_chr4_7995790_7996625
Length = 836
Score = 785 bits (406), Expect = 0.0
Identities = 426/434 (98%), Gaps = 3/434 (0%)
Strand = Plus / Minus
Query: 1 aataaaattgtcaagatgtagtggtggtctacttataggcatttggttatgaaatttaca 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 aataaaattgtcaagatgcagtggtggtctacttataggcatttggttatgaaatttaca 575
Query: 61 ggcttggggaagcactacgatggtagaataactgttcagtcactatggaactgttgtcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ggcttggggaagcactacgatggtagaataactgttcagtcactatggaactgttgtcct 515
Query: 121 tctcaatggaggcaatttcacataagccaagcagacttaactaaaatattaaaggtgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tctcaatggaggcaatttcacataagccaagcagacttaactaaaatattaaaggtgagg 455
Query: 181 ctttgctgccaacccccaatgacaataattactgccacagctgttcacaagaccaacaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ctttgctgccaacccccaatgacaataattactgccacagctgttcacaagaccaacaat 395
Query: 241 atgactatatatgttgggagataagtaaatttttaaaaataacaaaccatggctgtttag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atgactatatatgttgggagataagtaaatttttaaaaataacaaaccatggctgtttag 335
Query: 301 gcaatacattattcctcctagagaga---atttattagtaatactttcagctgagttctt 357
|||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||
Sbjct: 334 gcaatacattattcctcctagagagaagtatttattagtaatgctttcagttgagttctt 275
Query: 358 cactgcagctgctggtacaaatcagattaggctgggcatccttgcttatgtcaatcttca 417
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 274 cactgcagctgctgggacaaatcagattaggctgggcatccttgcttaagtcaatcttca 215
Query: 418 tatattaagatgta 431
||||||||||||||
Sbjct: 214 tatattaagatgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 836
Length adjustment: 9
Effective length of query: 424
Effective length of database: 827
Effective search space: 350648
Effective search space used: 350648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no097_p05.g1 MSMg01no097_p05.g1 CHROMAT_FILE:
MSMg01no097_p05.g1 PHD_FILE: MSMg01no097_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:53 2005
(343 letters)
>mm_chr4_7828417_7829160
Length = 744
Score = 627 bits (324), Expect = 0.0
Identities = 339/344 (98%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 1 aattctcctttataaaaaatcccaa-catatttttcattattttatgcaattagctcgtt 59
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 aattctcctttataaaaaatcccaaacatatttttcattattttatgcaattagctcgtt 260
Query: 60 ctttaaactcaaaggaagagaacaaataggactttgggaatttgtagatcaaagtatcta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 ctttaaactcaaaggaagagaacaaataggactttgggaatttgtagatcaaattatcta 320
Query: 120 cctaatctttgtagctaaattaagaacaaattaaacacattgcctagtttctagtgtgaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctaatctttgtagctaaattaagaacaaattaaacacattgcctagtttctagtgtgaa 380
Query: 180 acgaagaagcataaaaggtatttataggtgtgatttcaaacttatacatttttcactaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acgaagaagcataaaaggtatttataggtgtgatttcaaacttatacatttttcactaat 440
Query: 240 acataattatatttacaataggcatgcatcataaaaatgaagcccaacatgatgttttaa 299
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acataattataagtacaatagacatgcatcataaaaatgaagcccaacatgatgttttaa 500
Query: 300 tagcattcatagagctttcttctacaaggagctacaagcgtgtg 343
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagcattcatagagctttcttctacaaggagctacaagcgtgtg 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 744
Length adjustment: 9
Effective length of query: 334
Effective length of database: 735
Effective search space: 245490
Effective search space used: 245490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
