Query= MSMg01no098_m18.b1 MSMg01no098_m18.b1 CHROMAT_FILE:
MSMg01no098_m18.b1 PHD_FILE: MSMg01no098_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:01 2005
(253 letters)
>mm_chr4_96680967_96681619
Length = 653
Score = 466 bits (241), Expect = e-136
Identities = 250/253 (98%)
Strand = Plus / Plus
Query: 1 ttcttctgtgcaaggcctattctgactaggagtggcctcatctcagtttttacaagcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcttctgtgcaaggcctattctgactaggagtggcctcatctcagtttttacaagcaat 260
Query: 61 atgcttcctttggtttgttcttgaaggaccagctggaaattcctcctttatatttctaga 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 atgcttcctttggtttgttcttgaaggaccagctggaaattcctccgttatatttctaga 320
Query: 121 agttctccatagacaaagtacagtttgtacataacttgctggagcaagttacttattgtg 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 agttctccatagacaaagtacagtttgtgcataacttgctggagcaagttacttattgtg 380
Query: 181 gatatttgttttttatttgtgtatgatgaacccactgactaaaggtaggcctgtgttctc 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 gatatttgttttttatttgtgtatgatgaacccactgactaaaggcaggcctgtgttctc 440
Query: 241 ctgatcttcatac 253
|||||||||||||
Sbjct: 441 ctgatcttcatac 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 653
Length adjustment: 9
Effective length of query: 244
Effective length of database: 644
Effective search space: 157136
Effective search space used: 157136
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no098_m18.g1 MSMg01no098_m18.g1 CHROMAT_FILE:
MSMg01no098_m18.g1 PHD_FILE: MSMg01no098_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:01 2005
(289 letters)
>mm_chr4_96832025_96832711
Length = 687
Score = 520 bits (269), Expect = e-152
Identities = 284/289 (98%), Gaps = 2/289 (0%)
Strand = Plus / Minus
Query: 1 gggtattttgagcaacagttaaatgctgaattcaaagcgagtaaatgctcttctttccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gggtattttgagcaacagttaaatgctgaattcaaagcgagtaaatgctcttctttccag 428
Query: 61 tggatttggatggaggcacagaggcaggagagcctgacgtgggatttcctttgcctccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tggatttggatggaggcacagaggcaggagagcctgacgtgggatttcctttgcctccag 368
Query: 121 ccaaaagccacaggattctctcatttattctaaatcgtttgctctaaatgaacctcacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 367 ccaaaagccacaggattctctcatttattctaaatcgtttgctctaaatgaacctcatag 308
Query: 181 ttcacgctgcccaaagctcctagccccagtctttccctttttttttttctcaaactcttc 240
||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 307 ttcgcgctgcccaaagc-cctagccccagtctttccctttttttttt-ctcaaactcttc 250
Query: 241 tcaaatccactgtttaatctctgtccaaagactgaccacgggagaaatt 289
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 249 tcaaatccactgtttaatctctgtccaaagactgaccacaggagaaatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 687
Length adjustment: 9
Effective length of query: 280
Effective length of database: 678
Effective search space: 189840
Effective search space used: 189840
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
