Query= MSMg01no098_n08.b1 MSMg01no098_n08.b1 CHROMAT_FILE:
MSMg01no098_n08.b1 PHD_FILE: MSMg01no098_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:04 2005
(245 letters)
>mm_chr4_142411310_142411954
Length = 645
Score = 311 bits (161), Expect = 2e-89
Identities = 204/239 (85%), Gaps = 32/239 (13%)
Strand = Plus / Minus
Query: 1 ttttaaaagtatcagttatttgatattatttttatgtatggctcctggccattagtcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 323 ttttaaaagtatcagttatttgatattatttttatgtatggctcctggccactagtcaga 264
Query: 61 aaatagagagttgaatatatagcatatagttataaccctaaaataagttacactcatact 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 263 aaatagagagttgaatatatagcatatagttataaccctaaaataagttacactcatatt 204
Query: 121 agcatctatctatctatctatctatctatctatctatctatctatctatctatctatctc 180
||| |||||||||||||||||||||||||
Sbjct: 203 agc--------------------------------atctatctatctatctatctatctc 176
Query: 181 tatttatttattatgtgtacagatttgtggaagtcagagatgacttgtgggtgtcagtt 239
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 175 tatttatttattatgtgtacagatttgttgaagtcagagatgacttgtgggtgtcagtt 117
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no098_n08.g1 MSMg01no098_n08.g1 CHROMAT_FILE:
MSMg01no098_n08.g1 PHD_FILE: MSMg01no098_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:04 2005
(218 letters)
>mm_chr4_142278187_142278804
Length = 618
Score = 414 bits (214), Expect = e-120
Identities = 217/218 (99%)
Strand = Plus / Plus
Query: 1 tacagggaagggcgtgggatggctgtgcagattagcagcatgagccgggtacgtgtcttg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 tacagggaagggcgtgggatggctgtgcagattagcagcatgagccgggtacgtgtctcg 260
Query: 61 ggagtgttcccatttcataccaggtggagctttgttaattatgacaagaagttaaggtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagtgttcccatttcataccaggtggagctttgttaattatgacaagaagttaaggtca 320
Query: 121 gaggaaaactcataagaagagggtaaaacccacactttctgacaaaagttgtttttctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggaaaactcataagaagagggtaaaacccacactttctgacaaaagttgtttttctta 380
Query: 181 tgttgattcattttatgggtggacttgactaggccacg 218
||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttgattcattttatgggtggacttgactaggccacg 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 218
Length of database: 618
Length adjustment: 9
Effective length of query: 209
Effective length of database: 609
Effective search space: 127281
Effective search space used: 127281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
