Query= MSMg01no098_o23.b1 MSMg01no098_o23.b1 CHROMAT_FILE:
MSMg01no098_o23.b1 PHD_FILE: MSMg01no098_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:11 2005
(501 letters)
>mm_chr4_65736292_65737192
Length = 901
Score = 915 bits (473), Expect = 0.0
Identities = 491/497 (98%), Gaps = 1/497 (0%)
Strand = Plus / Plus
Query: 5 ggaattcttaattgcaccatgcttctttccaggtaactaggttatatctagttgacaata 64
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcttaattg-aggatgcttctttccaggtaactaggttatatctagttgacaata 264
Query: 65 aaaactaaccaagacagtgtggacttatgcgtgcatgtgcaagaaggaggatgatcttgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaactaaccaagacagtgtggacttatgcgtgcatgtgcaagaaggaggatgatcttgg 324
Query: 125 tgttgtctacaggaatttcaactattttgggacaagatttctcagtggcctggacatcac 184
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 tgttgtctataggaatttcaactatttggggacaagatttctcagtggcctggacatcac 384
Query: 185 caattacattgacaattcagcgagctccaatgtgtgtcatcacatgtagcatttcttagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caattacattgacaattcagcgagctccaatgtgtgtcatcacatgtagcatttcttagg 444
Query: 245 taggtgctgcagattagatgcagatcctcatgtttacaaggcaaacaattttctaaatga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taggtgctgcagattagatgcagatcctcatgtttacaaggcaaacaattttctaaatga 504
Query: 305 atgacttatcgagtcgacagagttattttgacaataatggctacctgccatacatagtgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgacttatcgagtcgacagagttattttgacaataatggctacctgccatacatagtgg 564
Query: 365 ccagcacactgtacagagatgactacacatgagcttaggtctcacatactgacaggcaag 424
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 565 ccagcacactgtacagagatgactatacatgagcttaggtctcacatactgacaggcaag 624
Query: 425 agtagcaatagttcttaaccaacgttggggaatctcacacgtaagctgtaagaggttgat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agtagcaatagttcttaaccaacgttggggaatctcacacgtaagctgtaagaggttgat 684
Query: 485 tcagaaactggtttatc 501
|||||||||||||||||
Sbjct: 685 tcagaaactggtttatc 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_o23.g1 MSMg01no098_o23.g1 CHROMAT_FILE:
MSMg01no098_o23.g1 PHD_FILE: MSMg01no098_o23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:12 2005
(475 letters)
>mm_chr4_65859780_65860654
Length = 875
Score = 870 bits (450), Expect = 0.0
Identities = 450/450 (100%)
Strand = Plus / Minus
Query: 1 tgcaggttagataaataaccggagagtcttaggactaggccagtttgcagatactttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgcaggttagataaataaccggagagtcttaggactaggccagtttgcagatactttgtt 391
Query: 61 ctcttaaggaaatctgagaggactataagcaaaaagttgaatttttccagcagaaagtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ctcttaaggaaatctgagaggactataagcaaaaagttgaatttttccagcagaaagtac 331
Query: 121 ttttgcttattttgcttatcttaatcctattttttttctgtggaatttctgctcctgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttttgcttattttgcttatcttaatcctattttttttctgtggaatttctgctcctgttt 271
Query: 181 ccttcctaatgttttctccctacaatgcccgcaccatttgatcctctgctaagcatagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ccttcctaatgttttctccctacaatgcccgcaccatttgatcctctgctaagcatagac 211
Query: 241 accaggaataaataataatgataataataataaaagaataccttattaccatcttctctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 accaggaataaataataatgataataataataaaagaataccttattaccatcttctctt 151
Query: 301 ggcaattttcttttctgctttattttattttatttttgctttttatattatgatttctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ggcaattttcttttctgctttattttattttatttttgctttttatattatgatttctta 91
Query: 361 caagactgctagatttgaataatggacacaatagtcctttctctgcaaaacagattaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 caagactgctagatttgaataatggacacaatagtcctttctctgcaaaacagattaaat 31
Query: 421 tgtgtgctacccagcattcatatccattcc 450
||||||||||||||||||||||||||||||
Sbjct: 30 tgtgtgctacccagcattcatatccattcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
