Query= MSMg01no112_b10.b1 MSMg01no112_b10.b1 CHROMAT_FILE:
MSMg01no112_b10.b1 PHD_FILE: MSMg01no112_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:08 2005
(317 letters)
>mm_chr4_20737398_20738114
Length = 717
Score = 549 bits (284), Expect = e-161
Identities = 301/310 (97%), Gaps = 8/310 (2%)
Strand = Plus / Minus
Query: 4 ggaattctattgctc--t--ccccaagatatttataccccccatactccagtcttttgta 59
||||||||||||||| | ||||||||||| ||||||||||||||||||||||||
Sbjct: 529 ggaattctattgctcaatgg----aagatatttatgccccccatactccagtcttttgta 474
Query: 60 acttggaagtccataccaccccctagtactgtcccaaagtcataggcatggttttattgc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 acttggaagtccataccaccccctagtactgtcccaaagtcataggcatggttttattgc 414
Query: 120 agaaccattttctcagacaaaaaacataacgtagatggttggaaaagtttcagtttcatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 agaaccattttctcagacaaaaaacataacgtagatggttggaaaagtttcagtttcatg 354
Query: 180 aaatctgaaagacattcctttatcggtatattggtgttttatgaattacctaagtcattc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aaatctgaaagacattcctttatcggtatattggtgttttatgaattacctaagtcattc 294
Query: 240 gacagaggctggcaacttaagggaatcacctcatgaacagctataaattaaagccttttg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gacagaggctggcaacttaagggaatcacctcatgaacagctataaattaaagccttttg 234
Query: 300 aaaattcttc 309
||||||||||
Sbjct: 233 aaaattcttc 224
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no112_b10.g1 MSMg01no112_b10.g1 CHROMAT_FILE:
MSMg01no112_b10.g1 PHD_FILE: MSMg01no112_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:08 2005
(295 letters)
>mm_chr4_20880397_20881091
Length = 695
Score = 571 bits (295), Expect = e-167
Identities = 295/295 (100%)
Strand = Plus / Minus
Query: 1 aaaaatcacattcatttatcagttgtggtgtctcagataaatcctctacagttgtactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aaaaatcacattcatttatcagttgtggtgtctcagataaatcctctacagttgtactct 273
Query: 61 agtgagccccactgaataaagatcttaaagtcttattaaggaaatgagattcaaaaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agtgagccccactgaataaagatcttaaagtcttattaaggaaatgagattcaaaaagca 213
Query: 121 gaaccaattattctagacagtggtgatgcactcctttagtctcagtactcaagaggcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gaaccaattattctagacagtggtgatgcactcctttagtctcagtactcaagaggcata 153
Query: 181 ggctggcagatttctgagtttgagagtagcctggtctgcagagaaagttccaaacagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ggctggcagatttctgagtttgagagtagcctggtctgcagagaaagttccaaacagtta 93
Query: 241 gggctacacagagaaaacctgtctcaaaaccaaagcaaaacaaacaaatgatgca 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 gggctacacagagaaaacctgtctcaaaaccaaagcaaaacaaacaaatgatgca 38
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
