Query= MSMg01no117_b02.b1 MSMg01no117_b02.b1 CHROMAT_FILE:
MSMg01no117_b02.b1 PHD_FILE: MSMg01no117_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:30 2005
(197 letters)
>mm_chr4_124025235_124025829
Length = 595
Score = 327 bits (169), Expect = 3e-94
Identities = 190/197 (96%), Gaps = 2/197 (1%)
Strand = Plus / Minus
Query: 1 gggttctaggggaagggctgcctcctcctcagcttccaggaagggaggtggtttctcttc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 369 gggttctaggggaagggctgcctcctcctcagcttccaggaaggcaggtggtttctcttc 310
Query: 61 catctctccagtccaggagcaaactgggaggagtccgcaggatgaacggttcccagggcg 120
|||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 309 catctctcca-tccaggagcaaactgggaggagtcctcaggatgaaccgttcccaggg-t 252
Query: 121 gtagagacctcatggctgacatcatcattgggcatcacagaattactgtaatggtggtgg 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gtatagacctcatggctgacatcatcattgggcatcacagaattactgtaatggtggtgg 192
Query: 181 tggtggtggtggtggtg 197
|||||||||||||||||
Sbjct: 191 tggtggtggtggtggtg 175
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 595
Length adjustment: 8
Effective length of query: 189
Effective length of database: 587
Effective search space: 110943
Effective search space used: 110943
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no117_b02.g1 MSMg01no117_b02.g1 CHROMAT_FILE:
MSMg01no117_b02.g1 PHD_FILE: MSMg01no117_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:30 2005
(526 letters)
>mm_chr4_123869839_123870764
Length = 926
Score = 1017 bits (526), Expect = 0.0
Identities = 526/526 (100%)
Strand = Plus / Plus
Query: 1 tgccctctgctgcagttaagagacaaggtgagagacagatcttgctatttccccaatggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgccctctgctgcagttaagagacaaggtgagagacagatcttgctatttccccaatggc 260
Query: 61 gcttaggttctccgggccttccctgtgagcatcaccctgagaataattctactgttccga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcttaggttctccgggccttccctgtgagcatcaccctgagaataattctactgttccga 320
Query: 121 gatatgaattctttatgtaacgtagacctcacatccagccaacagcttcatctggtactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatatgaattctttatgtaacgtagacctcacatccagccaacagcttcatctggtactt 380
Query: 181 aacccaaagaaaagtgatttgttccaacgatctgctgcctcggacttacagagtgatggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacccaaagaaaagtgatttgttccaacgatctgctgcctcggacttacagagtgatggc 440
Query: 241 gtcttggtccccctcctaagggatttgtaagggtaatttgaccatgcctggtttcccgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcttggtccccctcctaagggatttgtaagggtaatttgaccatgcctggtttcccgtt 500
Query: 301 tatacactgactttaaataccatctctacatcacacagacgactgtcatgggagcagccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatacactgactttaaataccatctctacatcacacagacgactgtcatgggagcagccg 560
Query: 361 gcacaggcatgacgttgggtacagctgggatgtgcgggaacgtaattagagggctccgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcacaggcatgacgttgggtacagctgggatgtgcgggaacgtaattagagggctccgtg 620
Query: 421 actgttaagggcccgttggattccaagagctggtgagtcggctgtgatctttggaatcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actgttaagggcccgttggattccaagagctggtgagtcggctgtgatctttggaatcct 680
Query: 481 cattagaaattctctccagagcctggggcatatgcttttgctcgtc 526
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cattagaaattctctccagagcctggggcatatgcttttgctcgtc 726
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
