TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAAAGTGCCATTTGAGTTTAATTTTATTTGACTATTTACTGTTAGG
TGTTTGGTTTTGGACCCTCACAAGGGACTGAGGTGCATATTTTACATATC
AACACAGACCTGGCCTCCAGTTTCTCCTAGTATCCCTCAGTCCCTACCTG
GCATATCGTTCCCCCAACCCTGATTTTTCCAACCCAGAGTCTGGGCTGCC
TTTCCTCCAGGGGCTGCTCCCTATATAATCCAGACATTTTGTTCCCTTCT
CCCTCCTCCCTCCTCCCTCCTCCCTCCTTCCCCCTCATTATCTGCCCCCC
CTTACCCCTTTTCTCCTTTCTCTCTCTGTTCTATACCCCTCCTCCTCCTT
TCCCAGTGGTGACTTCCCTGGCCTTGGTCTTTGAGGTCAACAAACTCACC
CACCAGAGAGCCTGCTTCCCACTAAACCTGCCTTTAATGTAATCTAATCT
GGTTGAATTGGCATGGCTGCAGAGATTAAAAATCCTATCACTGGGTATGC
AGTCTACCCTTAAGAAGAGTTTGTTTCCCCTTGGAGAAACTATTTTTTTT
TCATTTTCAAGAGATTATCAGTTGGAAATCACTTCTGGGGTAGGAATGGG
GTTATCCACTTCTTTGAGCTCTAGGACTCCAACTGGGGCAGATTTGTGCA
TGCTGGCTAATTC

GATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXACATAATTACAAACAAAAAGGG
GGGTCTCAAACTGAAGACTATAAAAGGTATTGGTTGGAGAATAAAAGGGA
ACAGAAAAATCAATAGGCAAGTAGAACTAAAAACTCAGAATAGATATAAA
AGTTTTATCCAAGTAGGAAAAGAGAGGATAGCAGAAGCAACAGTTAAAGA
AAAATTGATTAAAATTAAAAAGTCATTTTTAATCAAAACCTACTTCAAAA
ATTCAGAAGGGAAACAAATAGAACATATTTGCCACACATTGATGGAGCAT
AGGACCATATCCAGAGCAGAAAGCTGAGAAACAAGAATAAAAATACAGAT
GACCCAGTTCTTTAGGCAAGAAGGTTGAACAGTCTTCTGGCAGCAGAGGT
CACCAAAGGCCAGCAAGCACAAGGAAGAGCGCTGAGCAAACTCAGTCACC
AAGAGATGTGAATGGAAACCACACACCACCATAATAGAGAAAAAAAAAAC
ATGTTGCAGAGCGATGAGAGATGCAGCTCTCTTCTCTGCACAGAGACCCA
GTCTCAGAAGTTTCTCTTTGCTACTTTCTGCTCCATCTCTTAAGGTTCAC
AGCCACTTCAACAAATTACCTCCACTGTAAATACAATTATGAATGTACAA
GACCCCCTTTTCCTAGTACTCC

Query= MSMg01no135_a17.g1 MSMg01no135_a17.g1 CHROMAT_FILE:
MSMg01no135_a17.g1 PHD_FILE: MSMg01no135_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:04 2005
         (642 letters)



>mm_chr4_15386722_15387763
          Length = 1042

 Score = 1152 bits (596), Expect = 0.0
 Identities = 630/642 (98%), Gaps = 2/642 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acataattacaaacaaaaaggggggtctcaaactgaagactataaaaggtattggttgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acataattacaaacaaaaaggggggtctcaaactgaagactataaaaggtattggttgga 260

                                                                       
Query: 61  gaataaaagggaacagaaaaatcaataggcaagtagaactaaaaactcagaatagatata 120
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 gaataaaagggaacagaaaaatcaataggcaagcagaactaaaaactcagaatagatata 320

                                                                       
Query: 121 aaagttttatccaagtaggaaaagagaggatagcagaagcaacagttaaagaaaaattga 180
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatttttatccaagtaggaaaagagaggatagcagaagcaacagttaaagaaaaattga 380

                                                                       
Query: 181 ttaaaattaaaaagtcatttttaatcaaaacctacttcaaaaattcagaagggaaacaaa 240
           |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 ttaaaattaaaaagtcgtttttaatcaaaacctacttcaaaaattcagaagggaaacaga 440

                                                                       
Query: 241 tagaacatatttgccacacattgatggagcataggaccatatccagagcagaaagctgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagaacatatttgccacacattgatggagcataggaccatatccagagcagaaagctgag 500

                                                                       
Query: 301 aaacaagaataaaaatacagatgacccagttctttaggcaagaaggttgaacagtcttct 360
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaataagaataaaaatacagatgacccagttctttaggcaagaaggttgaacagtcttct 560

                                                                       
Query: 361 ggcagcagaggtcaccaaaggccagcaagcacaaggaagagcgctgagcaaactcagtca 420
           ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 561 ggcagcagaggtcaccaaaggccagcaagcataaggaagagtgctgagcaaactcagtca 620

                                                                       
Query: 421 ccaagagatgtgaatggaaaccacacaccaccataatagagaaaaaaaaaacatgttgca 480
           ||||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||
Sbjct: 621 ccaagagatgtgaatggaaaccacataccaccataatggagaaaaaaaa--catgttgca 678

                                                                       
Query: 481 gagcgatgagagatgcagctctcttctctgcacagagacccagtctcagaagtttctctt 540
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gagcgatgagagatgcagcgctcttctctgcacagagacccagtctcagaagtttctctt 738

                                                                       
Query: 541 tgctactttctgctccatctcttaaggttcacagccacttcaacaaattacctccactgt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tgctactttctgctccatctcttaaggttcacagccacttcaacaaattacctccactgt 798

                                                     
Query: 601 aaatacaattatgaatgtacaagacccccttttcctagtact 642
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 aaatacaattatgaatgtacaagacccccttttcctagtact 840


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space:   652224
Effective search space used:   652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)