Query= MSMg01no135_d09.b1 MSMg01no135_d09.b1 CHROMAT_FILE:
MSMg01no135_d09.b1 PHD_FILE: MSMg01no135_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:17 2005
(689 letters)
>mm_chr4_25947765_25948852
Length = 1088
Score = 683 bits (353), Expect = 0.0
Identities = 377/385 (97%), Gaps = 2/385 (0%)
Strand = Plus / Minus
Query: 5 gaattccaagtgaaaacttacttttcttttctttatgtaacacctattcactatcactga 64
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 383 gaattccaagtgaaaatttacttttcttttcttaatgtaacacctattcactatcactga 324
Query: 65 cacagaattaaaccctaatgcatttaatccatacaacaaaaaacatacaatttttgcaca 124
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 323 cacagaattaaaccctaatgcatttaatccatacaacaaaaaacatacaa-ttttgcaca 265
Query: 125 ttaatcatacttactcatttatcatacatattcatttagcatttactcatttatcatatc 184
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 264 ttaatcatacatactcatttatcatacatactcatttagcatttactcatttatcatatc 205
Query: 185 tattaaattttcttaattattttaagatattctataaaaattgatatgataatcttcatt 244
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 204 tattaaattttcttaattattttaagatattctat-aaaattgatatgataatcttcatt 146
Query: 245 gtcaacttggctgtcgagaagacacacctctgtatctttctgagaaggcatttccagata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gtcaacttggctgtcgagaagacacacctctgtatctttctgagaaggcatttccagata 86
Query: 305 gatttaactgaaatattaagttacatgtattcggtacaaccagatgggctgtaagctcac 364
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 85 gatttaactgaaatattaagttacatgtattcggtacaaccagacgggctgtaagctcac 26
Query: 365 ataggatgaaagagagaaaagaaga 389
||||||| |||||||||||||||||
Sbjct: 25 ataggataaaagagagaaaagaaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1088
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1078
Effective search space: 731962
Effective search space used: 731962
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_d09.g1 MSMg01no135_d09.g1 CHROMAT_FILE:
MSMg01no135_d09.g1 PHD_FILE: MSMg01no135_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:17 2005
(274 letters)
>mm_chr4_25835361_25836034
Length = 674
Score = 520 bits (269), Expect = e-152
Identities = 272/273 (99%)
Strand = Plus / Plus
Query: 1 atgaaaatgccataaggaaacaaagtattattataagtttacttaaaatgcataagcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgaaaatgccataaggaaacaaagtattattataagtttacttaaaatgcataagcttt 260
Query: 61 atgtgtgtgtgtgtatttatgtaaatgtgtctgactgttccggtgtatgtgtcaatatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtgtgtgtgtgtatttatgtaaatgtgtctgactgttccggtgtatgtgtcaatatct 320
Query: 121 gtgtgtctgtgctcacatgtatttgaatgaagttagtctacctgtctattctttaagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtgtctgtgctcacatgtatttgaatgaagttagtctacctgtctattctttaagaaa 380
Query: 181 gaatacattttggacacagggttttgaggagtcagctgtaactgacttgaaaacctcccc 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 gaatacattttggacacagggttttgaggagtcagctggaactgacttgaaaacctcccc 440
Query: 241 tctgactagttcttttgtttggtgggttggttg 273
|||||||||||||||||||||||||||||||||
Sbjct: 441 tctgactagttcttttgtttggtgggttggttg 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
