Query= MSMg01no136_h02.b1 MSMg01no136_h02.b1 CHROMAT_FILE:
MSMg01no136_h02.b1 PHD_FILE: MSMg01no136_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:50 2005
(632 letters)
>mm_chr4_16323245_16324276
Length = 1032
Score = 930 bits (481), Expect = 0.0
Identities = 481/481 (100%)
Strand = Plus / Minus
Query: 150 aagcataaagtcttaatacacagttacaataaactattattttatgctactttcacttaa 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 aagcataaagtcttaatacacagttacaataaactattattttatgctactttcacttaa 771
Query: 210 agcttgattgaaaaagaaagcaactaataggtagacattccattctatgtattcatgcaa 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 agcttgattgaaaaagaaagcaactaataggtagacattccattctatgtattcatgcaa 711
Query: 270 acatatccaaaatttgtgtgcttgccatctttttctgattcccttctaacattaaactct 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 acatatccaaaatttgtgtgcttgccatctttttctgattcccttctaacattaaactct 651
Query: 330 gtctgcttcatcttccagtccaaggtcaatgactctatttctttcacaatattcgattca 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gtctgcttcatcttccagtccaaggtcaatgactctatttctttcacaatattcgattca 591
Query: 390 ctctgactttctaaatagtctttcccaggaaagggagaaaaggctacaaattggaaagta 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ctctgactttctaaatagtctttcccaggaaagggagaaaaggctacaaattggaaagta 531
Query: 450 ttttataagtcttaaattaccgaaagagtggatgtgaaagaactatacaaagaaagattg 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttttataagtcttaaattaccgaaagagtggatgtgaaagaactatacaaagaaagattg 471
Query: 510 ttttttccttgatgtatactgaactcaactgcaaatgctggataaaacagtaaagtaaga 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttttttccttgatgtatactgaactcaactgcaaatgctggataaaacagtaaagtaaga 411
Query: 570 gctagagagatctgtctagcttcaaatgatacaataaaactagaggaaccataccaacat 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gctagagagatctgtctagcttcaaatgatacaataaaactagaggaaccataccaacat 351
Query: 630 a 630
|
Sbjct: 350 a 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_h02.g1 MSMg01no136_h02.g1 CHROMAT_FILE:
MSMg01no136_h02.g1 PHD_FILE: MSMg01no136_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:50 2005
(633 letters)
>mm_chr4_16125286_16126318
Length = 1033
Score = 1102 bits (570), Expect = 0.0
Identities = 618/634 (97%), Gaps = 3/634 (0%)
Strand = Plus / Plus
Query: 1 aaaacagaagggtagcaagaaacctgacaacagtgtcagtgtcagggataggggaattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aaaacagaagggtagcaagaaacctgacaacagtgtcagtgtcagggataggggaattaa 261
Query: 61 atgcaaaaaggattcaacccaccattgctggctttcaacatggaaaaaagaaaaaggaaa 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 262 atgcaaaaaggattcaacccaccattgctggctttcaacatgggaaaaagaaaaaggaaa 321
Query: 121 aagagaaatgaactgtaggtatcttccagaaaaagagaagagcagagcaaggaaatgaat 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 322 aagagaaatgaactgtaggtatcttccag-aaaagagaagagcagagcaaggaaatgaat 380
Query: 181 gctccttgtgacttctctaaaggatcccctgctgagatgctga-tttagtatgatgtgac 239
||||| ||||||||||||||||||||| ||||||||||||||| |||||||| |||||||
Sbjct: 381 gctcc-tgtgacttctctaaaggatcctctgctgagatgctgattttagtataatgtgac 439
Query: 240 ctagttcagatttctagaattaattataagatagtaagattaaattgttttaaaccagca 299
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 440 ctaattcagatttctagaattaattataagatagtaggattaaattgttttaaaccagca 499
Query: 300 ggctttggtaatttgaaagaatatcaataggaaatgattgtttctctttaccaaggctct 359
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 500 ggctttggcaatttgaaagaatatcaataggaaatgattgtttctctttagcaaggctct 559
Query: 360 ttttgatcaattttctatgtatcagtgtctgtggtgtcaatgttagatgtcaacacagac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttttgatcaattttctatgtatcagtgtctgtggtgtcaatgttagatgtcaacacagac 619
Query: 420 caatcaatatgttgaaactaaggattttagcagataggagtattagctcttacttagtcg 479
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 caatcaatatgttgcaactaaggattttagcagataggagtattagctcttacttagtcg 679
Query: 480 ttattagtggagaaggggaaaccagattaaccataaccatgctctctttctgaattgtat 539
|| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 680 tttttagtggagaaggggaaaccagattaaccataaccatgttctctttctggattgtat 739
Query: 540 tccactgaagtacaagttcaaaatactggggaaattcccactccactgccaacacagacc 599
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tctactgaagtacaagttcaaaatactggggaaattcccactccactgccaacacagacc 799
Query: 600 ttagctagcaataggtttatctatagccatgcca 633
||||||||||||||||||||||| ||||||||||
Sbjct: 800 ttagctagcaataggtttatctacagccatgcca 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
