NTAATATTTATTAATAATAATAATTTAATATTAAAAATATTAATAATACT
AATAACTATTTATCNAANTTCATATTATTTATTACATTATANANCTTATT
ACATTAACTCACCCCCCTCTTATAACTCATTTCTTCTCTAATCTTTTCTT
ATATATCACTGCCCCACCCGTATTATTATCACACACCACTAACCCACAAT
CACCCCAACTTCCCTCCCTTCTATCTTTTTTCCTTCACCCACCTCCCCTT
CTCATCTCTCAATCTCCCCTACCTACACCCCATACCTTCTTTTCTTTTTC
TCTTAACCAACTTTATCCATACTCATCTTCCATATCTCTTTCTAACCCTC
AATACCTTCACCACCACACCTCACTATTCCCCACGTTTCTAGTTACCTAG
CTTCACAATTGACTCCCGTCCCACTTTTTTCTATCACACTCACAAATAAT
AATATACCACCAACTCATTATTTACGCGTCTATCATCGTTTAACTTTTTT
TACCTTACTACCTCTTACTCGTCTTCTTTTGCTCCTTTCCCAATTGTTTT
TCGTATCCTTTCTCCCACCGTATTCTTACTATCATCATTATCTCTATTAT
TATTTTTGACCCGACGTATGCATACATGAGTATACAAGTTTTAGACGATA
GTCAGCGACATTACGCACCGATGTTAAAGATAAACAACATAGAAAACAAT
ATTAATCATTAGAAAAGTCTCTCATATGCGTATGTTTATATACAAAGATT
ATTATACGTCCCACTCCTACTATACCACCAATTTCACTATGTGTTTAACC
CCCCGACACCCACCCACCCATTTTATTTTCCTCAACCATTTCTTCCTTAC
TTTTATCTACACCGCAGTCGCGCCACTATACTTCCCATCTTATGTTTCAT
TAATCACCAACTCTGTATATCACTTTC

CACCNNNNCCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCATATTCTCTATAATT
ATTTTATTGCAGATGAAATTTAGATATTAATATTCAATTTTTATATTCCT
GATTCAAAATAACAATCCTAACTTATTCTAACAATTCAATATATACATAC
TTATACAGTGACAAATAACAGTGTATGCTATGTGAAAGAATCATCTTCTT
TAGGAAAAATAGGAAAAACATCTAGTCCCATGGATAACGATACAAGTGTC
TTGGTATCCTGTAAGTGCATGCCCATAAGTTTATGGACTACATTTGACAC
TTTGTGTGCTTTCCTTTCTATAACACTGAGTGCTAATTTAGAACCCAGAT
CTTAGTTTTTAGACTTTTGTATTCCTTGTCTATCACAACAAAAAGTATGT
GCTAGGTTCTTAATTACTATCTGTGGAATAAATGAAAGATTTTTAATAGC
TTCCTATGAAAAGAGAAACATACCAGTTCCTATTTCTAGGCGTAACAACT
GACTTCCCAGATGCTGCCAAATGTTCCCAACTCCTNGGATCACATGTTCA
TACTTGACAGAATAGGCATGAATAAATTAATGGGGTATTGCAAACACCCC
TGTGACTTTAGAGACTACATGAAAAAACATACCACGGCTTATATTTTTCC
CGTTT

Query= MSMg01no138_l01.g1 MSMg01no138_l01.g1 CHROMAT_FILE:
MSMg01no138_l01.g1 PHD_FILE: MSMg01no138_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:48 2005
         (531 letters)



>mm_chr4_70107248_70108178
          Length = 931

 Score =  971 bits (502), Expect = 0.0
 Identities = 522/529 (98%)
 Strand = Plus / Plus

                                                                       
Query: 3   atattctctataattattttattgcagatgaaatttagatattaatattcaatttttata 62
           |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 203 atattctctagaattattttattgcagatgacatttagatattaatattcaatttttata 262

                                                                       
Query: 63  ttcctgattcaaaataacaatcctaacttattctaacaattcaatatatacatacttata 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttcctgattcaaaataacaatcctaacttattctaacaattcaatatatacatacttata 322

                                                                       
Query: 123 cagtgacaaataacagtgtatgctatgtgaaagaatcatcttctttaggaaaaataggaa 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cagtgacaaataacagtgtatgctatgtgaaagaatcatcttctttaggaaaaataggaa 382

                                                                       
Query: 183 aaacatctagtcccatggataacgatacaagtgtcttggtatcctgtaagtgcatgccca 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aaacatctagtcccatggataacgatacaagtgtcttggtatcctgtaagtgcatgccca 442

                                                                       
Query: 243 taagtttatggactacatttgacactttgtgtgctttcctttctataacactgagtgcta 302
           |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 443 taagtttatggactacgtttgacaccttgtgtgctttcctttctataacactgagtgcta 502

                                                                       
Query: 303 atttagaacccagatcttagtttttagacttttgtattccttgtctatcacaacaaaaag 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atttagaacccagatcttagtttttagacttttgtattccttgtctatcacaacaaaaag 562

                                                                       
Query: 363 tatgtgctaggttcttaattactatctgtggaataaatgaaagatttttaatagcttcct 422
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 catgtgctaggttcttaattactatctgtggaataaatgaaagatttttaatagcttcct 622

                                                                       
Query: 423 atgaaaagagaaacataccagttcctatttctaggcgtaacaactgacttcccagatgct 482
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atgaaaagagaaacatgccagttcctatttctaggcgtaacaactgacttcccagatgct 682

                                                            
Query: 483 gccaaatgttcccaactcctnggatcacatgttcatacttgacagaata 531
           |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 683 gccaaatgttcccaactcctgggatcacatgttcatacttgacagaata 731


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space:   479841
Effective search space used:   479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)