Query= MSMg01no138_o15.b1 MSMg01no138_o15.b1 CHROMAT_FILE:
MSMg01no138_o15.b1 PHD_FILE: MSMg01no138_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:06 2005
(561 letters)
>mm_chr4_59768739_59769699
Length = 961
Score = 874 bits (452), Expect = 0.0
Identities = 461/464 (99%)
Strand = Plus / Minus
Query: 1 tgctcactgaaccacattatcaggcttggtttcctcttcaagtttacaatgtaaggaaca 60
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 464 tgctcactggaccacattatcaggtttggtttcctcttcaagtttacaatgtaaggaaca 405
Query: 61 gaatctcagcaatggaggaaataagtgaagcatgttactgacatttttaattagaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gaatctcagcaatggaggaaataagtgaagcatgttactgacatttttaattagaaagaa 345
Query: 121 agaaaactcattgcatgcctaagatacagctgaatgccaacctcttcgtgtccagtggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agaaaactcattgcatgcctaagatacagctgaatgccaacctcttcgtgtccagtggga 285
Query: 181 tctcctgctgataacctattacctggcaaaccattccccggagagaggcctggggcaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tctcctgctgataacctattacctggcaaaccattccccggagagaggcctggggcaata 225
Query: 241 gggaggtagcacctacaactgcaatttatttatcgtttatgtgtgtgggtgttttacctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gggaggtagcacctacaactgcaatttatttatcgtttatgtgtgtgggtgttttacctg 165
Query: 301 catgtatgtttgtcctctatgtttgtgcctagtgcctataggggccaaaagggggtgtca 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 164 catgtatgtttgtcctctatgtttgtgcctagtgcctgtaggggccaaaagggggtgtca 105
Query: 361 gatgcagactgtggactgccacgtgggtgtttagagtggaacccaagtcctctgaagaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 gatgcagactgtggactgccacgtgggtgtttagagtggaacccaagtcctctgaagaat 45
Query: 421 agctctagtcctctaattaatgaatgttaagtgtttgggggaca 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 agctctagtcctctaattaatgaatgttaagtgtttgggggaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_o15.g1 MSMg01no138_o15.g1 CHROMAT_FILE:
MSMg01no138_o15.g1 PHD_FILE: MSMg01no138_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:06 2005
(630 letters)
>mm_chr4_59686736_59687765
Length = 1030
Score = 1162 bits (601), Expect = 0.0
Identities = 622/630 (98%), Gaps = 2/630 (0%)
Strand = Plus / Plus
Query: 1 ccacttcaagactgagaactggagaacccaggggctgctgttcaggtcctagactcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ccacttcaagactgagaactggagaacccaggggctgctgttcaggtcctagactcagag 262
Query: 61 gccatagagcttatatgactgtgtccaaaggcaggtaaggaagaggccaatttgccttct 120
|||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 263 gccatagagcttatatgactat--ccaaaggcaggtaaggaagaggccaatttgccttct 320
Query: 121 gtacttgctttctcagggtctggctgatatgtagttggcaaaatccatctatatagaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtacttgctttctcagggtctggctgatatgtagttggcaaaatccatctatatagaagt 380
Query: 181 cagtcagcttaccagagagaagcaaatgatgctcatagctctgctttacagagcgttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtcagcttaccagagagaagcaaatgatgctcatagctctgctttacagagcgttcat 440
Query: 241 ttgtcaattaaatgttttagttgacttgcaagaatactgttcttaaatatatgcaggggc 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtcaattaaatgtattagttgacttgcaagaatactgttcttaaatatatgcaggggc 500
Query: 301 tatgagtacattcttatggatatattcctaatgaatctattaatatttatcagattttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgagtacattcttatggatatattcctaatgaatctattaatatttatcagattttaa 560
Query: 361 gctgagctctaagcttttccaatatggtcaagaatataggctatgaatatgaatatatgc 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 gctgagctctaagcttttccaatatggtcaagaatacaggctatgaatatgaatatatgc 620
Query: 421 tgatgaaaacatgaatatattcttggtgaatatattgatattcattaaaatttaaactag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgatgaaaacatgaatatattcttggtgaatatattgatattcattaaaatttaaactag 680
Query: 481 gttttaaaatgtcccaatatggtcaagaacatagttcatgaatatgaatataacttataa 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 gttttaaaatgtcccaatatggtcaagaacatagttcatgaatatgagtataacttataa 740
Query: 541 naatgttcatgaatatattcatgttcattaattttaaactgtattaaaaaagttttccca 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaatgttcatgaatatattcatgttcattaattttaaactgtattaaaaaagttttccca 800
Query: 601 acagggcaaggaagaatttattcatgaata 630
||||||||||||||||| ||||||||||||
Sbjct: 801 acagggcaaggaagaatgtattcatgaata 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
