GTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCGCGG
AATTCACAAAATTTCCAGGCAAATGGATGGAACTAGAAAATTCCATCCTG
AGTGAGTCAACCCAATCACAAAAGAGCAAACATTATATGCATTCACTGAT
GAGTGGATATTAGTCCAAGCTCAGAATACCCAAGATACAGTTCACAGACC
ACATGAAGCTCCAGAAGGTGGAAGACTAATAATGTGTGTGTGCCTCGGAC
CTTATGAGAAAAGAGAACCAAATTCTCATGGGAGCAAACACAGAAACAAC
ATGTGGAGCAGAGACTGAAGGAAAGGTCATCCAGAGACTGCCCCACCTGG
GGATCCATCCCATATACAGTCACCAAATGCAGAAACTATTGCTGATGCCA
AGAAGGACATGCTAACAGGAGCCTGATATAGATGTCTCCTGAGAGGCTCC
ACCAAAGCCTGACAAATACAGAGGGAGATACTGGCAGCCAACCATTGGAA
TGAGCATGGGGTGCCCAATGGAGGAGTTGTAGAAAGGACTGAAGGAGCTG
AAAGGGTTTCAAACCCCATCGGAACAATATAAACCAACCAGACACCCCAG
AGCTCCTAGGGACTGAGCCATCAACCAAGGAGTACACATGGAGGGACCCA
TGGCTCTAGTCACATATGTAGCAGAGGATTGCCTTGTTGGGAATCAATGG
GAGAAGAGGCCCTTGGTCTTG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAAGTCCCAGTTTGCATTTCTGACTCAGC
ACATGTAGGCTCTCCTGTCAGAGAGTTTGAATTTGATCTCCCAAACTCCA
AATTTTTTTCCCCATCATCTTTGTATATCATCTCCACTAGTTCTTCTAGT
TTCTTCTCCAAATATGTCTTCAAAGTCCTTCGTATTGCCTTCATTTTCCT
CCGATGTGAGATGCAAACATGGAATCTGGCTTAGAGAGAGAGAGGAAAAT
CTATAATTCAAGTTGAAATGCAATATTTTTTTAAAAATATGTAATTATTT
TCTTGTACATCTGGATTACTCTGTACTCCATCTCTCCTTCCCATCCAGCT
TGTGTGCTTTTTCCTTTCCCCCCTTTCCATGAGGAAAAGGGAATTTAGAC
AATCACAATCTCTTTTGCAAAGTAATGCTTGAAGGGGGTTTGGGGGGAAA
CTCACAGTAGCACAGCACTCGCCAAAATGACAGCTTCTGCTATAAATATC
AGATAGAGGGAAATCTCTCGATTTTCAGCGGTTTTTGGATCCTCATCTGG
AAGGAAAAATGAAATAGAGAAAATGAGTTTGCAACGAGCAGAATTGTGAC
TGTGACACTTTCTACAAAACGGATATATCACTATTGTTGGATTCCTTGTG
TTAAACCCTCCAGAAATTTT

Query= MSMg01no140_c17.g1 MSMg01no140_c17.g1 CHROMAT_FILE:
MSMg01no140_c17.g1 PHD_FILE: MSMg01no140_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:49 2005
         (636 letters)



>mm_chr4_91811039_91812074
          Length = 1036

 Score = 1193 bits (617), Expect = 0.0
 Identities = 632/637 (99%), Gaps = 2/637 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagtcccagtttgcatttctgactcagcacatgtaggctctcctgtcagagagtttgaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtcccagtttgcatttctgactcagcacatgtaggctctcctgtcagagagtttgaat 260

                                                                       
Query: 61  ttgatctcccaaactccaaatttttttccccatcatctttgtatatcatctccactagtt 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 ttgatctcccaaactccaaatttttttcaccatcatctttgtatatcatctccactagtt 320

                                                                       
Query: 121 cttctagtttcttctccaaatatgtcttcaaagtccttcgtattgccttcattttcctcc 180
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 cttctagtttcttctccaaatatgtcttcaaagttcttcgtattgccttcattttcctcc 380

                                                                       
Query: 181 gatgtgagatgcaaacatggaatctggcttagagagagagaggaaaatctataattcaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgtgagatgcaaacatggaatctggcttagagagagagaggaaaatctataattcaag 440

                                                                       
Query: 241 ttgaaatgcaatatttttttaaaaatatgtaattattttcttgtacatctggattactct 300
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgaaatgcaatatttttt-aaaaatatgtaattattttcttgtacatctggattactct 499

                                                                       
Query: 301 gtactccatctctccttcccatccagcttgtgtgctttttcctttcccccctttccatga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtactccatctctccttcccatccagcttgtgtgctttttcctttcccccctttccatga 559

                                                                       
Query: 361 ggaa-aagggaatttagacaatcacaatctcttttgcaaagtaatgcttgaagggggttt 419
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggaagaagggaatttagacaatcacaatctcttttgcaaagtaatgcttgaagggggttt 619

                                                                       
Query: 420 ggggggaaactcacagtagcacagcactcgccaaaatgacagcttctgctataaatatca 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggggggaaactcacagtagcacagcactcgccaaaatgacagcttctgctataaatatca 679

                                                                       
Query: 480 gatagagggaaatctctcgattttcagcggtttttggatcctcatctggaaggaaaaatg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gatagagggaaatctctcgattttcagcggtttttggatcctcatctggaaggaaaaatg 739

                                                                       
Query: 540 aaatagagaaaatgagtttgcaacgagcagaattgtgactgtgacactttctacaaaacg 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aaatagagaaaatgagtttgcaacgagcagaattgtgactgtgacactttctacaaaacg 799

                                                
Query: 600 gatatatcactattgttggattccttgtgttaaaccc 636
           |||||||||||||||||| ||||||||||||||||||
Sbjct: 800 gatatatcactattgttgcattccttgtgttaaaccc 836


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space:   642276
Effective search space used:   642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)