Query= MSMg01no143_b17.b1 MSMg01no143_b17.b1 CHROMAT_FILE:
MSMg01no143_b17.b1 PHD_FILE: MSMg01no143_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:34 2005
(476 letters)
>mm_chr4_10887478_10888355
Length = 878
Score = 857 bits (443), Expect = 0.0
Identities = 467/475 (98%), Gaps = 4/475 (0%)
Strand = Plus / Plus
Query: 5 gaattcctcgggtcgggaggtctctttt-ttgcctggaacacacatcagatgcc-gtgta 62
||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 205 gaattcctcgggttgggaggtctcttttcttgcctggaacacacatcagatgcccgtgta 264
Query: 63 taccctggatctttgaaggtataaaccaaagctgctgcccgccctctccttttatagcac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taccctggatctttgaaggtataaaccaaagctgctgcccgccctctccttttatagcac 324
Query: 123 cgagactccaggggcacgctggagcctcctatctcagggaaaccagaagcaaggttccct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgagactccaggggcacgctggagcctcctatctcagggaaaccagaagcaaggttccct 384
Query: 183 tgttacaggagtgaactgagctgggagggatgagggcccaaggccatcttgccttcttct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgttacaggagtgaactgagctgggagggatgagggcccaaggccatcttgccttcttct 444
Query: 243 ctgacctggctgtgacccagctcttgccccataccacctggcctgcctagagagccaggg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgacctggctgtgacccagctcttgccccataccacctggcctgcctagagagccaggg 504
Query: 303 gaaggtgacagacactacagtaggcttctgagacagttcaaatgctgtccctctggcttt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaaggtgacagacactacagtaggcttctgagacagttcaaatgctgtccctctggcttt 564
Query: 363 tccatcccgaacaggagcctggaaactgaactgcatccataacaaacaccagcaggttgt 422
||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 565 tccatgctgaacaggagcctggaaacagaactgcatccataacaaacaccagcaggttgt 624
Query: 423 ccttgagcagcctggcctcatccaggcatttcaaaacctaagcgc-ttgcttcgg 476
|||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 625 ccttgagcagcctggcctcatccaggcatttcaaaacctaag-gccttgcttcgg 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 878
Length adjustment: 10
Effective length of query: 466
Effective length of database: 868
Effective search space: 404488
Effective search space used: 404488
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_b17.g1 MSMg01no143_b17.g1 CHROMAT_FILE:
MSMg01no143_b17.g1 PHD_FILE: MSMg01no143_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:34 2005
(240 letters)
>mm_chr4_10987921_10988560
Length = 640
Score = 433 bits (224), Expect = e-126
Identities = 236/240 (98%)
Strand = Plus / Minus
Query: 1 acagtgtgtccttggtgtgctacagtcagagttaacaagcagagtcttccgatgtctacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 440 acagtgtgtccttggtgtgctacagtcagagttaacaagcagagtcttccgatgtctgcc 381
Query: 61 agcaggaagatccctgacatccagtttccatcataaatcgtgttttccagatgtcagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agcaggaagatccctgacatccagtttccatcataaatcgtgttttccagatgtcagaca 321
Query: 121 ggatggataccttgactgggtttaggtgatgtcttgtgctcttgatttgttatgcttcaa 180
| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaatggatacctttacagggtttaggtgatgtcttgtgctcttgatttgttatgcttcaa 261
Query: 181 ggacaacagagcaaccctgtttggtttctgtggttctaggcgtgaaggatcttcatgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggacaacagagcaaccctgtttggtttctgtggttctaggcgtgaaggatcttcatgcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
