MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-149C01
Chromosome	4 (Build37)
Map Location	58,656,098 - 58,656,566
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Palm2, Akap2, D630039A03Rik, Txn1, Txndc8, Svep1, Musk, Edg2, LOC675306
Downstream gene	LOC433711, Olfr267, AI314180, LOC100041581, Ltb4dh, 2010203O07Rik, Gng10, AI481877, LOC433712, Ugcg, LOC100041535, LOC634731, LOC666719, Rod1, Hsdl2, E130308A19Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Palm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242481 MGI:1934601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11641 MGI:1306795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	D630039A03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242484 MGI:2442889
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22166 MGI:98874
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txndc8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67402 MGI:1914652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Svep1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64817 MGI:1928849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Musk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18198 MGI:103581
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	Edg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14745 MGI:108429
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675306 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675306
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	LOC433711 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433711
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Olfr267 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258922 MGI:3030101
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI314180 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230249 MGI:2140220
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041581 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041581
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins

name	Ltb4dh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67103 MGI:1914353
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2010203O07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72429 MGI:1919679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gng10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14700 MGI:1336169
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI481877 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100155 MGI:2140313
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins

name	LOC433712 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433712
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 915 ESTs, 6 Proteins

name	Ugcg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22234 MGI:1332243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041535 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041535
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC634731 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:634731
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein

name	LOC666719 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666719
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Rod1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230257 MGI:1923334
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Hsdl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72479 MGI:1919729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E130308A19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230259 MGI:2442164
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Palm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93004083 GeneID:242481 MGI:1934601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paralemmin 2 transcript_id : NM_172868.2

name	Akap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78711835 GeneID:11641 MGI:1306795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein 2 transcript_id : NM_001035533.1

name	Akap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78711833 GeneID:11641 MGI:1306795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein 2 transcript_id : NM_001035532.1

name	Akap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78711831 GeneID:11641 MGI:1306795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein 2 transcript_id : NM_009649.2

name	D630039A03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:65301479 GeneID:242484 MGI:2442889
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D630039A03 gene transcript_id : NM_178727.2

name	Txn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123701799 GeneID:22166 MGI:98874
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin 1 transcript_id : NM_011660.3

name	Txndc8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365363 GeneID:67402 MGI:1914652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin domain containing 8 transcript_id : NM_026132.2

name	Svep1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124783267 GeneID:64817 MGI:1928849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 transcript_id : NM_022814.2

name	Musk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82533040 GeneID:18198 MGI:103581
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : muscle, skeletal, receptor tyrosine kinase transcript_id : NM_001037128.1

name	Musk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82533044 GeneID:18198 MGI:103581
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : muscle, skeletal, receptor tyrosine kinase transcript_id : NM_001037129.1

name	Musk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82533042 GeneID:18198 MGI:103581
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : muscle, skeletal, receptor tyrosine kinase transcript_id : NM_001037127.1

name	Musk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82533046 GeneID:18198 MGI:103581
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : muscle, skeletal, receptor tyrosine kinase transcript_id : NM_010944.2

name	Musk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82533048 GeneID:18198 MGI:103581
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : muscle, skeletal, receptor tyrosine kinase transcript_id : NM_001037130.1

name	Edg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754047 GeneID:14745 MGI:108429
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2 transcript_id : NM_010336.1

name	Olfr267 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129054 GeneID:258922 MGI:3030101
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 267 transcript_id : NM_146920.1

name	AI314180 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37718969 GeneID:230249 MGI:2140220
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI314180 transcript_id : NM_172381.2

name	LOC100041581 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252422 GeneID:100041581
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins product : similar to novel zinc finger protein (probable ortholog of rat HIT-10) transcript_id : XM_001476620.1

name	Ltb4dh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801462 GeneID:67103 MGI:1914353
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leukotriene B4 12-hydroxydehydrogenase transcript_id : NM_025968.3

name	2010203O07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701667 GeneID:72429 MGI:1919679
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010203O07 gene transcript_id : NM_001033165.1

name	Gng10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84490417 GeneID:14700 MGI:1336169
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine nucleotide binding protein (G protein), gamma 10 transcript_id : NM_025277.3

name	AI481877 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252424 GeneID:100155 MGI:2140313
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins product : expressed sequence AI481877 transcript_id : XM_001476641.1

name	LOC433712 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94371879 GeneID:433712
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 915 ESTs, 6 Proteins product : similar to 67 kda laminin receptor transcript_id : XM_620036.3

name	Ugcg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892814 GeneID:22234 MGI:1332243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-glucose ceramide glucosyltransferase transcript_id : NM_011673.3

name	LOC100041535 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252420 GeneID:100041535
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041535 transcript_id : XM_001476771.1

name	LOC634731 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252426 GeneID:634731
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : similar to sushi domain containing 1 transcript_id : XM_988632.2

name	Rod1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142389023 GeneID:230257 MGI:1923334
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ROD1 regulator of differentiation 1 (S. pombe) transcript_id : NM_178164.2

name	Rod1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450284 GeneID:230257 MGI:1923334
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ROD1 regulator of differentiation 1 (S. pombe) transcript_id : NM_144904.1

name	Hsdl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125656149 GeneID:72479 MGI:1919729
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxysteroid dehydrogenase like 2 transcript_id : NM_024255.2

name	E130308A19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62821810 GeneID:230259 MGI:2442164
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E130308A19 gene transcript_id : NM_001015681.1

name	E130308A19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370765 GeneID:230259 MGI:2442164
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E130308A19 gene transcript_id : NM_153158.2

name	Palm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27777697 CCDS:CCDS18202.1 GeneID:242481 MGI:1934601
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : paralemmin 2 protein_id : NP_766456.1

name	Akap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78711836 CCDS:CCDS18204.1 GeneID:11641 MGI:1306795
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0051018 - protein kinase A binding [Evidence IPI] GO_process : GO:0007015 - actin filament organization [Evidence IDA]; GO:0008104 - protein localization [Evidence IPI]; GO:0007178 - transmembrane receptor protein serine/threonine kinase signaling pathway [Evidence IPI] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; A kinase anchor protein 2 product : A kinase (PRKA) anchor protein 2 isoform 1 protein_id : NP_001030610.1

name	Akap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78711834 CCDS:CCDS18203.1 GeneID:11641 MGI:1306795
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0051018 - protein kinase A binding [Evidence IPI] GO_process : GO:0007015 - actin filament organization [Evidence IDA]; GO:0008104 - protein localization [Evidence IPI]; GO:0007178 - transmembrane receptor protein serine/threonine kinase signaling pathway [Evidence IPI] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; A kinase anchor protein 2 product : A kinase (PRKA) anchor protein 2 isoform 2 protein_id : NP_001030609.1

name	Akap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78711832 CCDS:CCDS18205.1 GeneID:11641 MGI:1306795
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0051018 - protein kinase A binding [Evidence IPI] GO_process : GO:0007015 - actin filament organization [Evidence IDA]; GO:0008104 - protein localization [Evidence IPI]; GO:0007178 - transmembrane receptor protein serine/threonine kinase signaling pathway [Evidence IPI] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; A kinase anchor protein 2 product : A kinase (PRKA) anchor protein 2 isoform 3 protein_id : NP_033779.2

name	D630039A03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520163 CCDS:CCDS18206.1 GeneID:242484 MGI:2442889
definition	codon_start : 1 product : hypothetical protein LOC242484 protein_id : NP_848842.1

name	Txn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755911 CCDS:CCDS18207.1 GeneID:22166 MGI:98874
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : thioredoxin 1 protein_id : NP_035790.1

name	Txndc8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229039 CCDS:CCDS18208.1 GeneID:67402 MGI:1914652
definition	GO_function : GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 product : thioredoxin domain containing 8 protein_id : NP_080408.2

name	Svep1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124783268 CCDS:CCDS18209.1 GeneID:64817 MGI:1928849
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS] GO_function : GO:0003682 - chromatin binding [Evidence IDA] codon_start : 1 note : polydomain protein; polydomain protein (Polydom) product : polydom precursor protein_id : NP_073725.2

name	Musk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82533041 GeneID:18198 MGI:103581
definition	EC_number : 2.7.10.1 GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence TAS] GO_process : GO:0007528 - neuromuscular junction development [Evidence IGI]; GO:0043113 - receptor clustering [Evidence IGI]; GO:0008582 - regulation of synaptic growth at neuromuscular junction [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP] codon_start : 1 note : isoform 2 precursor is encoded by transcript variant 2; muscle localized kinase; muscle-specific kinase receptor; muscle skeletal receptor tyrosine kinase product : skeletal muscle receptor tyrosine kinase isoform 2 precursor protein_id : NP_001032205.1

name	Musk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82533045 GeneID:18198 MGI:103581
definition	EC_number : 2.7.10.1 GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence TAS] GO_process : GO:0007528 - neuromuscular junction development [Evidence IGI]; GO:0043113 - receptor clustering [Evidence IGI]; GO:0008582 - regulation of synaptic growth at neuromuscular junction [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP] codon_start : 1 note : isoform 3 precursor is encoded by transcript variant 3; muscle localized kinase; muscle-specific kinase receptor; muscle skeletal receptor tyrosine kinase product : skeletal muscle receptor tyrosine kinase isoform 3 precursor protein_id : NP_001032206.1

name	Musk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82533043 GeneID:18198 MGI:103581
definition	EC_number : 2.7.10.1 GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence TAS] GO_process : GO:0007528 - neuromuscular junction development [Evidence IGI]; GO:0043113 - receptor clustering [Evidence IGI]; GO:0008582 - regulation of synaptic growth at neuromuscular junction [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP] codon_start : 1 exception : mismatches in translation note : isoform 1 precursor is encoded by transcript variant 1; muscle localized kinase; muscle-specific kinase receptor; muscle skeletal receptor tyrosine kinase product : skeletal muscle receptor tyrosine kinase isoform 1 precursor protein_id : NP_001032204.1

name	Musk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82533047 CCDS:CCDS18211.1 GeneID:18198 MGI:103581
definition	EC_number : 2.7.10.1 GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence TAS] GO_process : GO:0007528 - neuromuscular junction development [Evidence IGI]; GO:0043113 - receptor clustering [Evidence IGI]; GO:0008582 - regulation of synaptic growth at neuromuscular junction [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP] codon_start : 1 note : isoform 4 precursor is encoded by transcript variant 4; muscle localized kinase; muscle-specific kinase receptor; muscle skeletal receptor tyrosine kinase product : skeletal muscle receptor tyrosine kinase isoform 4 precursor protein_id : NP_035074.2

name	Musk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82533049 CCDS:CCDS18210.1 GeneID:18198 MGI:103581
definition	EC_number : 2.7.10.1 GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence TAS] GO_process : GO:0007528 - neuromuscular junction development [Evidence IGI]; GO:0043113 - receptor clustering [Evidence IGI]; GO:0008582 - regulation of synaptic growth at neuromuscular junction [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP] codon_start : 1 note : isoform 5 precursor is encoded by transcript variant 5; muscle localized kinase; muscle-specific kinase receptor; muscle skeletal receptor tyrosine kinase product : skeletal muscle receptor tyrosine kinase isoform 5 precursor protein_id : NP_001032207.1

name	Edg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754048 CCDS:CCDS18212.1 GeneID:14745 MGI:108429
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : G-protein coupled receptor 26; clone 4.9 product : endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2 protein_id : NP_034466.1

name	Olfr267 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129055 CCDS:CCDS18213.1 GeneID:258922 MGI:3030101
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2N78B-1272842-1273783; olfactory receptor MOR262-1 product : olfactory receptor 267 protein_id : NP_667131.1

name	AI314180 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37718970 CCDS:CCDS18214.1 GeneID:230249 MGI:2140220
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : novel protein containing 10 HEAT domains product : hypothetical protein LOC230249 protein_id : NP_759013.2

name	LOC100041581 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252423 GeneID:100041581
definition	codon_start : 1 product : similar to novel zinc finger protein (probable ortholog of rat HIT-10) protein_id : XP_001476670.1

name	Ltb4dh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385466 CCDS:CCDS18215.1 GeneID:67103 MGI:1914353
definition	GO_function : GO:0047522 - 15-oxoprostaglandin 13-oxidase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 product : leukotriene B4 12-hydroxydehydrogenase protein_id : NP_080244.1

name	2010203O07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701668 CCDS:CCDS18216.1 GeneID:72429 MGI:1919679
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC72429 protein_id : NP_001028337.1

name	Gng10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384616 CCDS:CCDS18217.1 GeneID:14700 MGI:1336169
definition	GO_component : GO:0005834 - heterotrimeric G-protein complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005083 - small GTPase regulator activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA] codon_start : 1 note : guanine nucleotide binding protein (G protein) gamma 10 product : guanine nucleotide binding protein (G protein), gamma 10 protein_id : NP_079553.1

name	AI481877 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252425 GeneID:100155 MGI:2140313
definition	codon_start : 1 product : hypothetical protein LOC100155 protein_id : XP_001476691.1

name	LOC433712 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:63514363 GeneID:433712
definition	codon_start : 1 product : similar to 67 kda laminin receptor protein_id : XP_620036.1

name	Ugcg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106443 CCDS:CCDS18219.1 GeneID:22234 MGI:1332243
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008120 - ceramide glucosyltransferase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 note : ectoplacental cone, invasive trophoblast giant cells, extraembryonic ectoderm and chorion sequence 21; UDP-glucose ceramide glucosyltransferase-like product : UDP-glucose ceramide glucosyltransferase protein_id : NP_035803.1

name	LOC100041535 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252421 GeneID:100041535
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476821.1

name	LOC634731 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252427 GeneID:634731
definition	codon_start : 1 product : hypothetical protein protein_id : XP_993726.2

name	Rod1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450285 CCDS:CCDS18220.1 GeneID:230257 MGI:1923334
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : ROD1 regulator of differentiation 1 isoform 1 protein_id : NP_659153.1

name	Rod1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30039680 CCDS:CCDS18221.1 GeneID:230257 MGI:1923334
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : ROD1 regulator of differentiation 1 isoform 2 protein_id : NP_835458.1

name	Hsdl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125656150 GeneID:72479 MGI:1919729
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : hydroxysteroid dehydrogenase-like 2 protein product : hydroxysteroid dehydrogenase like 2 protein_id : NP_077217.2

name	LOC666719 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666719
definition	number : 1 pseudo : _no_value

name	LOC675306 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252416 GeneID:675306
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to STAT3-interacting protein as a repressor pseudo : _no_value transcript_id : XR_032762.1

name	LOC433711 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252417 GeneID:433711
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical gene supported by AK078800 transcript_id : XR_035311.1

clone name	MSMg01-235A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496G01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-114L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324J05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-402J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066H20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-149C01.T7 (MSMg01no149_c01.b1)	MSMg01-149C01.TJ (MSMg01no149_c01.g1)
ACC	AG351933	AG351934
length	705	795
length of high quality (start - end)	468 (47 - 514)	33 (66 - 98)
definition	CHROMAT_FILE: MSMg01no149_c01.b1 PHD_FILE: MSMg01no149_c01.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:12:17 2005	CHROMAT_FILE: MSMg01no149_c01.g1 PHD_FILE: MSMg01no149_c01.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:12:17 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CATCTATAATTGCGGCGCTAAACGACTCCTATAGTTCGAGAAAGGCGGAA TTCACTTATGTTTTCTCCTATCCGCCTGCCCAAGCTGTGCTGGAGGAAGT TACACAGCGGGCTGGAGGAGTTCAGTGTAGGTGGGAATCTCCTCACCACC GTCCACAGATAGCCTCGCCCTCTACATTCCTTCCTTTCTCCAGCAGGAGC TAGACTGACACAGCTGGGTCCTACATTATGTGAGTGACAGACAGAGATTT CTGGTTCAAGGCCAGCTGCAAGTGTCTGGTATCTGTTCATAGATGTGCCA ATTAGGACATGAATAGCACATGACTAGTTTTTCATGCTAAACCCAGAGTA AATCCAGTTCTTACAGTTTCAGCAACCTTCATTGCTAGGCACTAAGGTCT CAGCCCCCAAGTCTCTGAAATGAGGGCATTTCTTATCTCTACCTGGAAAT CTATACTTCCCCCAGCTATCTGCTTATTCAACTCATGGTTATGCTATTCA CTAGATCAAAAGATTCACTAGGCCACTGGTCATGTCTGCTTTTACTCACA AGGCACAGTTTTAGCTTTCTAAAATTTTTAATTAGTTAGTTAGTGAATTA ATTAATTAACTAATTTTTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCT CTGGCTCTCTTGGAATTCACCTCTGTAAAGTAATCTGGCCTCAGATTCAT AGAGG	CCGATGCAGTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXTCGGAGGGAGGGAGGGAGGGAGGGAGGGAGGTATC NTTTCTTTTCCTCCTTTCCCTTCTTTCTCCTTTTTTTTTTCTATATCTTT CCTCTTTTCCCTCAAACAATCTATCACTCTATTTTAATCTAATATCTACA ACTATAAACCTCAGCATACCCCTGAGTATCTCCATCCTGTCGCGAGCACC GCCCCATACCCTACTACCTACCCGAGCCCATCTCAAATCACAAACCCTCT CCCCCTAGCGATGTCTAAAAAAATCATACGACACAACCAACACATTTTAT TTCCCCCCCGGCCCCCCGGGGCGCGCGGCGGTGTGGCACGGCCCGCACCC TTGCCCACCACGCAACTTGTCTCACTGCCTTCCTTACTACCGCGCTCCGC CCCGCACGCGTTTGATTATCCCTCCGAAATGCCTGCACTGTACTCCCCCT TACCCACACTTTGCCCTCCCTTCCCACCATACTGCACTTGCACTTCCACA TTGTCCTGTCATCCTCTTGTACCTCCCCTTCCTATACACCCCATCCTTCC CTGCTCCTGACGCTTCCTCGCCTCCTCGTGACACTATATTCTCTTCCCGG TAGCTAAGTCTCTTGTACTCTCACCGCGTCCTAGTTTTTATGTCCCTCGC GTCCCCGACTTCGAACCGTAATTAATACTCCTCCACCGCTATTTCTTTAT ACTACGCCCCGTGCTCTTGCTTTCCCCCACCCTGCCTCACTCGCG
quality values	Open. Hide. 7 8 8 10 8 10 9 8 8 8 22 15 17 12 12 19 24 23 23 12 11 11 22 19 23 16 10 10 10 19 22 22 11 6 6 7 6 6 8 8 8 8 8 10 10 21 18 23 25 28 31 31 31 31 31 31 44 41 50 30 25 15 16 9 8 8 8 8 8 15 16 30 37 33 39 32 31 18 10 10 18 17 34 28 34 34 34 43 34 34 43 48 48 57 59 68 57 57 57 47 43 37 28 25 26 26 31 31 43 47 43 43 43 47 57 57 59 57 57 40 36 22 28 21 30 30 57 57 50 50 48 50 50 50 50 28 28 19 28 28 35 28 32 28 32 42 42 42 35 32 29 29 29 32 33 43 43 57 57 57 57 57 52 52 43 43 37 38 41 43 43 52 43 50 50 57 57 52 52 52 57 52 52 52 57 57 52 52 52 43 42 43 44 52 52 52 57 57 52 52 52 57 57 52 52 52 57 43 39 33 33 42 43 57 57 59 47 47 35 41 43 43 57 52 52 57 57 57 57 68 57 57 57 57 57 57 52 52 52 62 52 52 52 62 62 62 62 43 43 39 39 43 43 43 43 31 39 35 44 43 44 35 35 39 43 43 52 52 52 52 62 62 62 45 45 45 62 62 43 43 43 43 43 43 44 43 45 52 52 52 62 52 52 62 62 62 43 39 39 35 62 43 59 43 35 35 43 43 52 62 62 62 62 62 62 52 62 52 52 52 44 44 35 35 35 43 43 52 62 44 44 52 45 45 62 43 52 52 43 43 35 31 35 27 20 43 43 57 57 57 43 43 39 39 35 38 38 43 35 43 43 57 52 45 45 52 52 57 52 52 42 43 31 33 33 42 43 43 57 43 52 57 57 57 57 57 57 57 57 59 43 43 43 59 59 59 59 38 32 32 32 27 43 27 29 33 43 43 43 43 43 41 41 43 43 43 52 43 43 43 43 43 50 43 44 44 43 43 43 50 43 43 47 59 47 48 48 48 48 47 47 44 42 42 47 47 57 46 44 47 47 47 48 59 57 46 46 44 43 43 57 46 47 47 48 48 44 44 37 32 32 30 30 30 37 37 39 39 31 31 37 37 32 39 39 37 40 42 34 29 33 34 39 43 34 37 29 24 23 23 29 29 28 28 28 37 37 36 39 37 25 23 10 10 10 15 15 26 28 20 20 19 21 13 15 15 23 23 9 9 9 18 23 28 30 30 37 37 37 37 47 32 32 20 18 18 15 15 14 26 24 25 25 16 16 16 18 20 16 25 28 31 30 30 30 39 39 33 21 13 13 12 16 24 37 40 39 33 29 22 22 18 32 30 28 28 21 19 10 11 11 16 12 9 9 9 12 10 12 17 20 24 19 19 20 28 19 15 10 10 10 19 19 28 34 28 28 12 9 8 9 9 13 14 10 10 11 18 15 11 10 10 8 8 15 23 28 26 26 22 19 19 11 11 8 13 10 10 8 8 10 10 12 11 11 10 12 15 19 19 15 8 8 8 8 8 14 12 14 11 11 10 8 8 8 6 6 8 8 8 8 8 9 11 12 13 17 10 10 10 8 8 8 11 12 16 16 12 11 10 10 12 10 9 9	Open. Hide. 7 7 8 8 10 10 9 9 9 13 9 9 9 12 12 16 19 19 23 35 34 27 24 23 18 18 23 27 30 26 21 17 9 9 9 6 6 8 8 8 8 9 9 9 18 9 10 10 10 10 15 21 33 33 33 33 33 31 33 30 26 18 11 10 10 10 10 9 10 18 28 32 33 36 47 47 48 48 59 48 48 48 59 59 59 48 59 48 48 47 41 40 39 23 23 11 11 11 8 3 0 3 8 8 10 10 12 10 8 8 6 6 8 10 10 8 8 10 10 8 8 8 8 8 8 6 6 7 8 9 8 11 11 22 11 13 8 8 8 6 8 6 6 6 8 6 6 8 8 11 9 8 8 6 6 8 8 11 9 9 10 10 10 8 11 8 8 8 8 10 10 8 8 8 9 11 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 10 10 10 9 9 8 8 11 10 6 6 6 6 8 8 9 9 9 9 9 9 8 8 8 8 8 8 9 9 10 9 9 9 9 9 8 8 10 10 8 8 10 10 10 10 10 10 7 6 8 8 8 8 8 6 8 6 6 6 8 11 11 7 7 8 8 8 10 8 9 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 8 8 6 7 10 8 8 8 8 11 8 7 9 10 8 6 6 6 6 8 8 12 14 12 11 11 11 10 10 10 10 11 11 11 10 10 11 13 15 11 11 11 11 13 13 13 13 11 11 11 10 10 10 10 10 10 11 8 8 8 8 8 8 9 14 11 8 8 8 12 10 13 11 11 11 11 12 12 10 12 15 15 13 10 8 6 6 6 6 6 6 10 6 6 8 6 10 10 12 8 10 7 6 8 8 8 10 10 18 16 19 13 8 8 8 8 8 10 9 9 10 10 10 10 10 9 9 10 9 8 8 8 8 6 6 6 6 6 8 8 8 8 6 6 8 8 9 10 12 9 9 9 6 6 6 6 6 6 8 8 10 10 8 8 8 8 8 7 9 11 10 10 10 12 12 12 15 11 11 8 10 8 8 8 8 10 11 11 11 11 11 10 8 8 8 8 8 8 8 8 8 8 6 7 6 6 8 10 10 10 8 8 8 8 10 12 12 13 15 15 11 8 8 8 8 8 8 9 12 10 9 11 12 10 10 13 12 14 14 14 12 9 8 8 8 8 8 8 8 8 10 10 10 10 10 10 11 10 8 8 8 8 8 8 10 9 8 8 8 8 8 8 9 9 11 8 9 9 9 9 9 10 10 9 10 10 10 8 8 8 10 8 8 8 8 8 6 6 8 8 10 8 7 6 6 6 8 8 8 8 10 11 11 11 15 19 23 10 10 6 6 6 8 6 6 8 8 8 8 6 6 8 8 8 8 8 8 8 9 9 9 10 6 6 6 6 6 6 8 8 8 10 10 12 12 12 13 12 15 15 11 10 8 8 8 8 6 6 6 6 6 6 8 8 10 10 10 10 14 9 10 9 9 11 8 8 8 8 8 8 10 8 8 8 8 7 7 8 8 9 12 11 11 10 13 18 10 10 9 15 11 10 10 13 8 8 8 10 8 8 8 10 8 8 9 8 8 8 8 10 8 12 11 11 10 8 8 8 8 8 8 8 8 8 8 7 9 10 10 9 8 8 8 8 8 6 6 6 6 6 8 8 10 10 10 8 8 8 6 6 6 8 8 8 8 8 8 8 8 8 6 6 6 8 13 10 12 12 12 8 8 8 8 10 8 8 8 8 10 9 10 10 10 10 11 14 14 12 12 11 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no149_c01.b1 MSMg01no149_c01.b1 CHROMAT_FILE:
MSMg01no149_c01.b1 PHD_FILE: MSMg01no149_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:17 2005
         (468 letters)



>mm_chr4_58655897_58656766
          Length = 870

 Score =  822 bits (425), Expect = 0.0
 Identities = 458/469 (97%), Gaps = 2/469 (0%)
 Strand = Plus / Minus

                                                                       
Query: 2   gaattcacttatgttttctcc-tatccgcctgc-ccaagctgtgctggaggaagttacac 59
           |||||||||||||||  |||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 670 gaattcacttatgttccctccatatccgcctgcaccaagctgtgctggaggaagttacac 611

                                                                       
Query: 60  agcgggctggaggagttcagtgtaggtgggaatctcctcaccaccgtccacagatagcct 119
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 610 agcgggctggaggagttcagtgtaggtgggaatctcctcaccaccgtccacagacagcct 551

                                                                       
Query: 120 cgccctctacattccttcctttctccagcaggagctagactgacacagctgggtcctaca 179
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 cgccctctgcattccttcctttctccagcaggagctagactgacacagctgggtcctaca 491

                                                                       
Query: 180 ttatgtgagtgacagacagagatttctggttcaaggccagctgcaagtgtctggtatctg 239
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttatgtgagtgacagacagaggtttctggttcaaggccagctgcaagtgtctggtatctg 431

                                                                       
Query: 240 ttcatagatgtgccaattaggacatgaatagcacatgactagtttttcatgctaaaccca 299
           |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 430 ttcatagatgtgccaattaggacatgaatagcacatgactagtttttcatggaaaaccca 371

                                                                       
Query: 300 gagtaaatccagttcttacagtttcagcaaccttcattgctaggcactaaggtctcagcc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gagtaaatccagttcttacagtttcagcaaccttcattgctaggcactaaggtctcagcc 311

                                                                       
Query: 360 cccaagtctctgaaatgagggcatttcttatctctacctggaaatctatacttcccccag 419
           ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 310 cccaagtctctgaaatgagggcatttcctatctctacctagaaatctatacttcccccag 251

                                                            
Query: 420 ctatctgcttattcaactcatggttatgctattcactagatcaaaagat 468
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ctatctgcttattcaactcatggttatgctattcactagatcaaaagat 202


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 870
Length adjustment: 10
Effective length of query: 458
Effective length of database: 860
Effective search space:   393880
Effective search space used:   393880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information