XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
AGACCTAGTAACATATATTATAAATATTATTAAATAGGATGATATCTGAA
CTTTTCCCATAAGCCTGGACTATAAGATTTTTGACACATAGCAAATATAA
GGATCCTTCCAGAATGTTTAGTATGCTATGTACTGGAAATGAATTTACTA
TTCATATTTATAGAAACTTTCAATATCTTATTGTCAGAATGTAGTCCTAA
TAATTTAAAGCTAAAATCATCAGTATTAATTATGTATAAAATTATATCTA
TATGCACACACTGTGAAATGACTATAACATTTGGATTGTCACAAGAAGAT
ATAGTTAGTGACAAAAATACATAAAATCTAATCTCCTGGTAGTTTCCAAG
AATACAATATATTGTTATTAACTATAGATATCATTAGTAAGATATAACTT
TTAATGTGATTTGCTCTATATAACATAACTATACCATCTTTTGAGTAATT
TTTACACAATATCATATTTTAGACACTTATAAACGCCACTACTCTACTAT
GTACTTCTGTAATTTCAAATTCCTGAGAATCCATGTATGAGTGAGATCAC
ACATGTTAACATTACATTGACTATCTTATTTTATTTAAAATAATATTTTT
GAGGCATTTCTTAAATACAATCTCCTGGTCAAGCATGGAGCAGAGAAATC
TGGATGAGCAAATAAGTTTTTCTCAT

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCTGCTTAGCTCTACACTCCATATTTTGAT
TGACTTCTTTGATTTTCTAGAGTTTAGCTTCTTGAGTTCTCTATATATTT
TGGGTATTAACCCACTATCTGATGTGCAGTTAGGGAAGATATTTTTCCCA
ATCTGTAGTTTGCTGATTTGTCCTATTTACTCTGTCTTTTGCCTTATAGG
CTTTTCAGTTTCATGAGGTCCCAATGATCAATTCTTGATCTGAGACCCTG
AGCCATTGGAGTTCTGTTTAGGAAACATCCCGACCCTGTTCCAATGAGTT
CAGGGCTCTTTCCTTCTTTCTCTAGTGTTAGATTTACTGTATATGGTTTT
ATGTTGAGGTCCTTGATCCACTTGGACTTGAGCTTTGAACAAAGTGACAA
GTATGGGTTTATTTTCATTTTTCTTCATAGCGATTGCCAGTTAGACCGTC
ACCATTTATTGAGGCTGCTTTCTTATTTGCATTGCATATGTTTGGTTTCT
TTGTCATAGATCATGTGACCATAAGGTGTGGTTTTACTTCTGGGTCCTCA
GACCTCTTCCTCTGCATAACCCTGCCTGTTTCTGTTCCCATCCCATACAG
TCTCTATCTCCACTGTTCTGTTTTACGCCCACCGTTGTTCCCGACGATTT
CTCGCCCAATTACCTACTCGTTTT

Query= MSMg01no149_h24.b1 MSMg01no149_h24.b1 CHROMAT_FILE:
MSMg01no149_h24.b1 PHD_FILE: MSMg01no149_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:47 2005
         (650 letters)



>mm_chr4_37073275_37074324
          Length = 1050

 Score = 1056 bits (546), Expect = 0.0
 Identities = 555/558 (99%), Gaps = 1/558 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcagacctagtaa-catatattataaatattattaaataggatgatatctgaact 62
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ggaattcagacctagtaagaatatattataaatattattaaataggatgatatctgaact 499

                                                                       
Query: 63  tttcccataagcctggactataagatttttgacacatagcaaatataaggatccttccag 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tttcccataagcctggactataagatttttgacacatagcaaatataaggatccttccag 439

                                                                       
Query: 123 aatgtttagtatgctatgtactggaaatgaatttactattcatatttatagaaactttca 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aatgtttagtatgctatgtactggaaatgaatttactattcatatttatagaaactttca 379

                                                                       
Query: 183 atatcttattgtcagaatgtagtcctaataatttaaagctaaaatcatcagtattaatta 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atatcttattgtcagaatgtagtcctaataatttaaagctaaaatcatcagtattaatta 319

                                                                       
Query: 243 tgtataaaattatatctatatgcacacactgtgaaatgactataacatttggattgtcac 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tgtataaaattatatctatatgcacacactgtgaaatgactataacatttggattgtcac 259

                                                                       
Query: 303 aagaagatatagttagtgacaaaaatacataaaatctaatctcctggtagtttccaagaa 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aagaagatatagttagtgacaaaaatacataaaatctaatctcctggtagtttccaagaa 199

                                                                       
Query: 363 tacaatatattgttattaactatagatatcattagtaagatataacttttaatgtgattt 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tacaatatattgttattaactatagatatcattagtaagatataacttttaatgtgattt 139

                                                                       
Query: 423 gctctatataacataactataccatcttttgagtaatttttacacaatatcatattttag 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gctctatataacataactataccatcttttgagtaatttttacacaatatcatattttag 79

                                                                       
Query: 483 acacttataaacgccactactctactatgtacttctgtaatttcaaattcctgagaatcc 542
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 78  acacttataaacgccactactctactatgtacttctgtaatttcaagttcctgagaatcc 19

                             
Query: 543 atgtatgagtgagatcac 560
           ||||||||||||||||||
Sbjct: 18  atgtatgagtgagatcac 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space:   665600
Effective search space used:   665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)