NAATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCTTCATGAGCTCATGTAGCTCTGTGCAGATCAGCAGGGCAGT
TGAAGTCAGAGAATAAGAAGGAGACAGAAGATTAGAGCACATTGCCAGAG
TTAGAGGCCAAGCAAAGCAGTTTCAGTCAGAAGCTGAGAAAAGTTAGATT
AAATCAGTCACCTTGGTTAAGAGTCGGCCATCACTGCAAAGAGAGGCCCA
TTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAA
AAAGGGGGAGTGGGTGGGTAGGGGATTGTTTNNNNCCCCTTTCTTTCTTC
CTCTTCTTTTCATTATTATCCCTCCCATATTCATCATATTTATATTTTCT
CGCGATTATTTATTGTTTCCCACCCCCTCGTGGTTTTCGTTCCTTTCCTT
TTTTATTTATCCTCTTATTTTATGATCTTTTTCTCTCTTATTCTTATTTC
CAACCATTTCTCTCCGCTTTCTCTCTTATCTACCCTTATCAAACTATACT
TTCCACCTATTCATCCTCCCTCCCTTCGTTCCCTCTTTCACTTTTGGTTG
ATTGCTTCTATTCCCTTCTCTTTGTCTCTCCCTTTTCGTTCTATCGGCCT
CCTTCCCACTTCGCCCTCACTATCTCCCACTTTCGTTCTTGTTTTTTGTG
TACTTTGTCTTCTCTCTTTCTGTGTGTGCTTATTCTTTGTTTCGGTGTTT
TGCGCTAGTTTTGTC

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTACAGATAAAAATCCTGAACCTC
TTCTATGTTTTCTTGTATTTGTTTTCTGGCCTCAGGAATTCTATTTACGC
TTCTGATAAGATTTGGTGTTTTTTGTTGTGCTGGAAATAAAATTAAAGTT
CAGCATGGTCTCTTTGGATTACGGTACCGATTTCCCTAGTTGTAGTGGCT
GGAGCAGCATCCCATCCCAACAGTTTTTGGTTCCAAAACCATTGTCTAGG
TTTAGTTCTGTACCAACTCTTCTGTTCTCCACATGTTGCTGTAATGGTAG
CCATTTAAATAAACATTTTGATACCAAGGAGCATAATGTTGTTGACTCTG
TTATTTAATTATGCTGTTTTGGCTATGCAGAATCATTACTGGTTCTACAA
AGATTTTTGAATTGTTCTTTTTCTTTCCATATAAAATTCCAGAGAGATTT
TGACATGAATTAAATGATATTTGTAAATAACTTTGAATAGATGAACATTA
CAATAAGATTAGTCTTCATAAGTGATATAAAATTGAATATGTTTTTAAAT
GATTTCATGAATATTCTATATTTTTCTCTATGTTCTTTTATTAAATTTTA
TTTATTTACACTCAGATTTTATTCCCCTCCTGGTCTACCTTCT

Query= MSMg01no149_i16.g1 MSMg01no149_i16.g1 CHROMAT_FILE:
MSMg01no149_i16.g1 PHD_FILE: MSMg01no149_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:51 2005
         (589 letters)



>mm_chr4_77740054_77741043
          Length = 990

 Score = 1120 bits (579), Expect = 0.0
 Identities = 588/591 (99%), Gaps = 2/591 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttaca-gataaaaatcctgaacctcttctatgttttcttgtatttgttttctggcctca 59
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttacaagataaaaatcctgaacctcttctatgttttcttgtatttgttttctggcctca 260

                                                                       
Query: 60  ggaattctatttacgcttctgataagatttggtgttttttgttgtgctggaaataaaatt 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaattctatttacgcttctgataagatttggtgttttttgttgtgctggaaataaaatt 320

                                                                       
Query: 120 aaagttcagcatggtctctttggattacggtaccgatttccctagttgtagtggctggag 179
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagttcagcatagtctctttggattacggtaccgatttccctagttgtagtggctggag 380

                                                                       
Query: 180 cagcatcccatcccaacagtttttggttccaaaaccattgtctaggtttagttctgtacc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagcatcccatcccaacagtttttggttccaaaaccattgtctaggtttagttctgtacc 440

                                                                       
Query: 240 aactcttctgttctccacatgttgctgtaatggtagccatttaaataaacattttgatac 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aactcttctgttctccacatgttgctgtaatggtagccatttaaataaacattttgatac 500

                                                                       
Query: 300 caaggagcataatgttgttgactctgttatttaattatgctgttttggctatgcagaatc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaggagcataatgttgttgactctgttatttaattatgctgttttggctatgcagaatc 560

                                                                       
Query: 360 attactggttctacaaagatttttgaattgttctttttctttccatataaaattccagag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attactggttctacaaagatttttgaattgttctttttctttccatataaaattccagag 620

                                                                       
Query: 420 agattttgacatgaattaaatgatatttgtaaataactttgaatagatgaacattacaat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agattttgacatgaattaaatgatatttgtaaataactttgaatagatgaacattacaat 680

                                                                       
Query: 480 aagattagtcttcataagtgatataaaattgaatatgtttttaaatgatttcatgaatat 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagattagtcttcataagtgatataaaattgaatatgtttttaaatgatttcatgaatat 740

                                                              
Query: 540 tctatatttttctctatgttcttttattaaa-ttttatttatttacactca 589
           ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 741 tctatatttttctctatgttcttttattaaacttttatttatttacactca 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 990
Length adjustment: 10
Effective length of query: 579
Effective length of database: 980
Effective search space:   567420
Effective search space used:   567420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)