TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAGGCCCATACCTAAATGTAATAAAAGCAATATACAGCAAACCAG
TAGCCAACATCAAACTAAATGGAGAGAAACTTGAAGCAATCCCACTAAAA
TCAGAGACTACTCAAGGATGCCCACTTTCTCCCTAGCTAGTCAATATAGT
ACTTGAAGTCCTAGCCAGAGCAATTAGACAACAAAAGGAGATCAAGGGGA
TACAAATTAGAAAGGAAGAAGTCAAAATATCACTATTTGCATATGATATG
ATAGTATATATAAGTGACCCTAAAACTTCCACCAGAGAACTCCTAAACCT
GATAAGCATGTTCAGTGCAGTAGCTGCATATAAAATTAACACAAATTAGT
GGCCTTTCTCTACATAAAGCATAATCAGGCTGAGAAAGATATTAGATAAA
TAACATCCTTCACAATAGTCACAAATAATATAAAATACCTTGGTGTGACT
CTAACTAAGGAAGTGAAAGATCTGTATGATAAGAACTTCAAGTCTCTTAA
GAAAGAAATCAAAGAAGATCGCAGAAGATGGAAAGATCTCCCATGCTCAT
GGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAAGTTAGC
TACAGATTCAATTCAATCCCCATCAAAGTTCCAATTCAATTCTTTAGTGA
GTTACAAGGGTAATTTGCAAATTTATCTGG

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAATATCAATTCAACAGATGATTTTTT
TCTTGATCTTCATTCCAATATTTATTTACATTCTTGTTTAGTTCCTTTAG
TGTATTCCTCACTTTTCTTTTGAATTCATGACCTCAAGTGTCATTTTAGG
AATAATTATTATGGGCTTAATAATATTGATATTGATCTTCATGTTGTTTG
TGTTTTTAAAATGGAATCTGAACATCTGAAGGTAGATTGTAGGTTGTGCC
TTTTGGTACAGTTCTCTGGTTCATCTTTGTTAAGGGGCATTTGGTTTTCA
TTTGACATTATCAAGGCTTGGCAGAGTTTGAAGCAGGTAGACAATACTTG
TGTTAAGTCTGGGGTCCACTACCTGCTGATTTAAGGTTGTGGAATCTGAA
GTGATAATAGGTTAGTTAGAGAAAGGTACCAAATGTAGACTGACTAGCTG
AAATTCTGTTGACTGAGCAGATTCTATCATTGGATTCTCAGAAGTTGAGA
TTAGGGAATCGGAGATAAGTAGATGTGAGGGCTGCAAGCATACTACACAG
GGGGTAAGCCCCAGGTCTCATATGGCACTGTTAGGGTCCTAGTGAAATGG
GGATGTTAGGAGCATCTGGGGAGCAAGCAAAGGGTTTTATATATATCATC
ACAGAGCAGGATGAGTGTCCCAAAGGAN

Query= MSMg01no151_f01.g1 MSMg01no151_f01.g1 CHROMAT_FILE:
MSMg01no151_f01.g1 PHD_FILE: MSMg01no151_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:05 2005
         (571 letters)



>mm_chr4_28401335_28402305
          Length = 971

 Score = 1042 bits (539), Expect = 0.0
 Identities = 563/571 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatatcaattcaacagatgatttttttcttgatcttcattccaatatttatttacattct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 771 aatatcaattcaacagatgatttttttcttgatcttcattccaatatttatttgcattct 712

                                                                       
Query: 61  tgtttagttcctttagtgtattcctcacttttcttttgaattcatgacctcaagtgtcat 120
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 711 tgtttagttcctttagtgtattcctcaattttcttttgaattcatgacctcaagtgtcat 652

                                                                       
Query: 121 tttaggaataattattatgggcttaataatattgatattgatcttcatgttgtttgtgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tttaggaataattattatgggcttaataatattgatattgatcttcatgttgtttgtgtt 592

                                                                       
Query: 181 tttaaaatggaatctgaacatctgaaggtagattgtaggttgtgccttttggtacagttc 240
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 591 tttaaaatggaatctgaacatctgaagttagattgtaggttgtgccttttggtacagttc 532

                                                                       
Query: 241 tctggttcatctttgttaaggggcatttggttttcatttgacattatcaaggcttggcag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tctggttcatctttgttaaggggcatttggttttcatttgacattatcaaggcttggcag 472

                                                                       
Query: 301 agtttgaagcaggtagacaatacttgtgttaagtctggggtccactacctgctgatttaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 471 agtttgaagcaggtagacaatacttgtgttaagtctggggtccactagctgctgatttaa 412

                                                                       
Query: 361 ggttgtggaatctgaagtgataataggttagttagagaaaggtaccaaatgtagactgac 420
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 411 ggttgtggaatctgaagtgataataggctagttagagaaaggtaccaaatgtagactgac 352

                                                                       
Query: 421 tagctgaaattctgttgactgagcagattctatcattggattctcagaagttgagattag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tagctgaaattctgttgactgagcagattctatcattggattctcagaagttgagattag 292

                                                                       
Query: 481 ggaatcggagataagtagatgtgagggctgcaagcatactacacagggggtaagccccag 540
           |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 291 ggaatcagagataagtagatgtgagggctacaagcatactacacagggggtaagccccag 232

                                          
Query: 541 gtctcatatggcactgttagggtcctagtga 571
           |||||| ||||||||||||||||||||||||
Sbjct: 231 gtctcaaatggcactgttagggtcctagtga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)