Query= MSMg01no154_c16.b1 MSMg01no154_c16.b1 CHROMAT_FILE:
MSMg01no154_c16.b1 PHD_FILE: MSMg01no154_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:43 2005
(567 letters)
>mm_chr4_87370392_87371358
Length = 967
Score = 1089 bits (563), Expect = 0.0
Identities = 563/563 (100%)
Strand = Plus / Plus
Query: 5 gaattcttcattgtatcttctaagcttctagtttgctggtaactgttgacatcccttggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcattgtatcttctaagcttctagtttgctggtaactgttgacatcccttggc 264
Query: 65 ttgcaggtgccttagtcatcctacagcattctgggtatcttgtgaatcttataaggacat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgcaggtgccttagtcatcctacagcattctgggtatcttgtgaatcttataaggacat 324
Query: 125 gagtcatgtcggattacgtgcctgctctagtctagtatgacttctttctaaccaacacat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagtcatgtcggattacgtgcctgctctagtctagtatgacttctttctaaccaacacat 384
Query: 185 ctagaacaaacttatttccaaagtaggtcataacctgaaatattggcagcaggggttctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctagaacaaacttatttccaaagtaggtcataacctgaaatattggcagcaggggttctt 444
Query: 245 caggaattcatgtttatgttaaattcttatcactctatatttccctgtcccacttcaaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caggaattcatgtttatgttaaattcttatcactctatatttccctgtcccacttcaaga 504
Query: 305 aagtcaagcttgactctcaatgaaggcatcatctaagagactcaatccttgacctgaagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagtcaagcttgactctcaatgaaggcatcatctaagagactcaatccttgacctgaagg 564
Query: 365 cttcttttcccttcatgcctcagtttctaccttagggaattctccaggagacagaaggga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttcttttcccttcatgcctcagtttctaccttagggaattctccaggagacagaaggga 624
Query: 425 tttggcatcaatgtagaagtgactcacacaacaggccacacagtaactacaagattcccc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttggcatcaatgtagaagtgactcacacaacaggccacacagtaactacaagattcccc 684
Query: 485 aactcaaagtgggaggtcaactgacctccacagcctgtggattcttctggaaagtcactt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aactcaaagtgggaggtcaactgacctccacagcctgtggattcttctggaaagtcactt 744
Query: 545 gcctttcttgaccagaaaattac 567
|||||||||||||||||||||||
Sbjct: 745 gcctttcttgaccagaaaattac 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_c16.g1 MSMg01no154_c16.g1 CHROMAT_FILE:
MSMg01no154_c16.g1 PHD_FILE: MSMg01no154_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:43 2005
(287 letters)
>mm_chr4_87529346_87530032
Length = 687
Score = 495 bits (256), Expect = e-144
Identities = 279/292 (95%), Gaps = 10/292 (3%)
Strand = Plus / Minus
Query: 1 tcatgtagagtagattgaggaggttgtttctcctctttccttgtgtgtgcctgtctggag 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 611 tcatgtagagtagattgaggaggttgtttctcctctttccttgtgtgtgtgtgtctggag 552
Query: 61 actgaactcaggtcttcaggtttggtagcaagtgcctctactggctgagccaccttgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 actgaactcaggtcttcaggtttggtagcaagtgcctctactggctgagccaccttgctg 492
Query: 121 gccctattgtttacttctaattaagaactcggggtactgtacaggcatcatttgttgtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gccctattgtttacttctaattaagaactcggggtactgtacaggcatcatttgttgtaa 432
Query: 181 atgaaaattttacacttaaaaataattgaggtataagttaataaatattttttatgaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 atgaaaattttacacttaaaaataattgaggtataagttaataaatattttttatgaaaa 372
Query: 241 cagacttgtttttt-----atattaatgcacatcagatcacttcctttagga 287
|||||||| | ||||||||||||| |||||||||||||||||||
Sbjct: 371 cagacttg-----tacagaatattaatgcacagcagatcacttcctttagga 325
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
