XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACAAGT
ACTACACTCAAGTTAAACCAAAAAGAGAAACTTGAAGACACATGAAGTTG
AGGGTAGATTGAACATTGAATATTCCCAGAGGCTGGATGCTCCTTTATTC
CATTGTTGAGAATATGATCTGTTGATTAATTTTATTATTTAATTAAATTT
TATTTGTTTATTTTTTAAAACTTTCAAAAAATAACACATGCTGAAATTAA
CCTGACCCAAAACCTACATAGCTCAATGAACTTCTACACAGTCAGAAAAG
CCACCCAGAATGGAAGCTTCCCACTGGATTTTACACACTATTGAGTGGAT
TTTTATGCATGCATACACCACTAGAACAAAAGTCCTGGTAAGAGTAAAAC
TAGAAAAAGATATCTTTATATCCCCTTTCATGTCTGTATCTACATCCATC
CTTCCTCATTTCAATATTTAATAATTTTTGTTTTCCTCCCTCCTTGTATT
AATTTCTTTTATATTTTTCTTTCTTGACAATCATTTAAATTCTGCTGCCA
TTCTTTTTTTTTCCAGAGTTGATTTAACCCCCACTGCTTCACAAGGCAGT
GTCCCATGCATGTCACCCCATTCTGTATAGATGGTCCAGCTTCAGAAAAG
AATTTTTCTGCATCCTAAATCCACTATGAGAAACAGTTGTATTTTCTCTA
TTTCTTCCTATGTGTTCATTATTTATAAACATAAAAAAA

GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAACACCTGAAA
AAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCT
GAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTG
ACAGCAGATGCTGGCGAGGATGTGGAGAAAGAAGAACACTCCTCCATTGT
TGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGATT
CCTCAGAAAATTGGACATAGTACTACCGGAGATCCAGCAATACCTCTCTT
GTTTTGTATATCCACACCATGCCCCAACGGGTAAGAAGGACACATGCTCC
ACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACC
CAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACA
CAATGGAGTACTACTCAGCTATTAAAAAACTGAATTTATGAACTTCCTAG
GCAAATAGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCA
TAAAGGAACTCACACAAAATATGTACTCACTGATAAGTGGATATTAGCCC
AAAACCTAGGATACCCAAGATATAAGATACAATTTCCTAAACACATGAAA
CTCAAGAAAAATGAAGACTGAAGTGTGGACACTATG

Query= MSMg01no157_c11.b1 MSMg01no157_c11.b1 CHROMAT_FILE:
MSMg01no157_c11.b1 PHD_FILE: MSMg01no157_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:27 2005
         (697 letters)



>mm_chr4_81382085_81383179
          Length = 1095

 Score = 1259 bits (651), Expect = 0.0
 Identities = 682/693 (98%), Gaps = 2/693 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacaagtactacactcaagttaaaccaaaaagagaaacttgaagacacatgaagt 64
           |||||||||||||| | ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 205 gaattcacaagtaccagactcaagttaaaccaaaaagagaaacttgaag--acatgaagt 262

                                                                       
Query: 65  tgagggtagattgaacattgaatattcccagaggctggatgctcctttattccattgttg 124
           ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgagggtagatagaagattgaatattcccagaggctggatgctcctttattccattgttg 322

                                                                       
Query: 125 agaatatgatctgttgattaattttattatttaattaaattttatttgtttattttttaa 184
           |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 323 agaatatgatctgttgattaattttattatttaattaaattttatttacttattttttaa 382

                                                                       
Query: 185 aactttcaaaaaataacacatgctgaaattaacctgacccaaaacctacatagctcaatg 244
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 383 aactttcaaaaaataacacatgctgaaattaaccagacccaaaacctacatagctcaatg 442

                                                                       
Query: 245 aacttctacacagtcagaaaagccacccagaatggaagcttcccactggattttacacac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aacttctacacagtcagaaaagccacccagaatggaagcttcccactggattttacacac 502

                                                                       
Query: 305 tattgagtggatttttatgcatgcatacaccactagaacaaaagtcctggtaagagtaaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tattgagtggatttttatgcatgcatacaccactagaacaaaagtcctggtaagagtaaa 562

                                                                       
Query: 365 actagaaaaagatatctttatatcccctttcatgtctgtatctacatccatccttcctca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 actagaaaaagatatctttatatcccctttcatgtctgtatctacatccatccttcctca 622

                                                                       
Query: 425 tttcaatatttaataatttttgttttcctccctccttgtattaatttcttttatattttt 484
           ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 623 tttcaatttttaataatttttgttttcctcccttcttgtattaatttcttttatattttt 682

                                                                       
Query: 485 ctttcttgacaatcatttaaattctgctgccattctttttttttccagagttgatttaac 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ctttcttgacaatcatttaaattctgctgccattctttttttttccagagttgatttaac 742

                                                                       
Query: 545 ccccactgcttcacaaggcagtgtcccatgcatgtcaccccattctgtatagatggtcca 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ccccactgcttcacaaggcagtgtcccatgcatgtcaccccattctgtatagatggtcca 802

                                                                       
Query: 605 gcttcagaaaagaatttttctgcatcctaaatccactatgagaaacagttgtattttctc 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gcttcagaaaagaatttttctgcatcctaaatccactatgagaaacagttgtattttctc 862

                                            
Query: 665 tatttcttcctatgtgttcattatttataaaca 697
           |||||||||||||||||||||||||||||||||
Sbjct: 863 tatttcttcctatgtgttcattatttataaaca 895


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1095
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1085
Effective search space:   745395
Effective search space used:   745395
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)