Query= MSMg01no164_p05.b1 MSMg01no164_p05.b1 CHROMAT_FILE:
MSMg01no164_p05.b1 PHD_FILE: MSMg01no164_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:56 2005
(323 letters)
>mm_chr4_122891853_122892574
Length = 722
Score = 540 bits (279), Expect = e-158
Identities = 302/317 (95%), Gaps = 13/317 (4%)
Strand = Plus / Minus
Query: 4 ggaattcctaccaagcttcaagacacggttctgttctcagagaggcatttagaagtggaa 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ggaattcctaccaagctccaagacacggttctgttctcagagaggcatttagaagtggaa 401
Query: 64 gagccggtgaggttccctgagccacatacggcatgacaaggggtggccccgggtccctat 123
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 400 gagccggtgaggttccctgagccacatacggcatgacaaggggtgaccccgggtccctat 341
Query: 124 gagggtgcaatagggagttcttcttgtctcccagtgaaggaaacaggagtttctggcaga 183
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gagggtgcaata-ggagttcttcttgtctcccagtgaaggaaacaggagtttctggcaga 282
Query: 184 atggggctttactcagaagggtatcccaagagaggagctgaaggtcacagggaaaagaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atggggctttactcagaagggtatcccaagagaggagctgaaggtcacagggaaaagaca 222
Query: 244 gtgggttaaaaagtaggc------------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 291
|||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 221 gtgggttaaaaagtaggcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 162
Query: 292 atcagatttttgaggag 308
|||||||||||||||||
Sbjct: 161 atcagatttttgaggag 145
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 722
Length adjustment: 9
Effective length of query: 314
Effective length of database: 713
Effective search space: 223882
Effective search space used: 223882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_p05.g1 MSMg01no164_p05.g1 CHROMAT_FILE:
MSMg01no164_p05.g1 PHD_FILE: MSMg01no164_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:56 2005
(235 letters)
>mm_chr4_122724013_122724647
Length = 635
Score = 437 bits (226), Expect = e-127
Identities = 232/234 (99%)
Strand = Plus / Plus
Query: 1 tcaggttccctaacccatgcatcctctggctccatgctgaccaggcaggtaaatgcttcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaggttccctaacccatgcatcctctggctccatgctgaccaggcaggtaaatgcttcg 260
Query: 61 gtccagagtctgtctgagacaaaacggagaatactagggttttatgtgtcaagtgcttcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtccagagtctgtctgagacaaaacggagaatactagggttttatgtgtcaagtgcttcg 320
Query: 121 aaccactggtggctgacactgagcactagtgtgagctcccaagtttactgtgtcagccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaccactggtggctgacactgagcactagtgtgagctcccaagtttactgtgtcagccac 380
Query: 181 cacaccttgccttagaccccatgcagcgcttccttagtgattcaggaaagaagg 234
||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 381 cacaccttgccttagaccccatgtagtgcttccttagtgattcaggaaagaagg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
