Query= MSMg01no164_p08.b1 MSMg01no164_p08.b1 CHROMAT_FILE:
MSMg01no164_p08.b1 PHD_FILE: MSMg01no164_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:57 2005
(319 letters)
>mm_chr4_96767972_96768689
Length = 718
Score = 598 bits (309), Expect = e-175
Identities = 312/313 (99%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 5 gaattcaataggatcagcttctccaaacccctggttgaaatagccctagtttaatgatcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaataggatcagcttctccaaacccctggttgaaatagccctagtttaatgatcc 264
Query: 65 aaagagagtctgattggtgtcttactgcgtcaaagacaaagaaatcgttttatcttgtag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaagagagtctgattggtgtcttactgcgtcaaagacaaagaaatcgttttatcttgtag 324
Query: 125 ctgtgtgccctacctcattcaaagttacatttctcagtgccagagttcataatttcaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgtgtgccctacctcattcaaagttacatttctcagtgccagagttcataatttcaaaa 384
Query: 185 aatattcctcagctgttcatcacaattttgttggctgtatacaaggtgcaggtgctgttg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatattcctcagctgttcatcacaattttgttggctgtatacaaggtgcaggtgctgttg 444
Query: 245 gtacaaagacatgaactactcaaaccctgccatgtaaaggcttgcaagcaaggaaaatgg 304
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 445 gtacaaagacatgaactactcaaaccctgccatgtaaaggcttgcaagcaag-aaaatgg 503
Query: 305 atgtttgcatttg 317
|||||||||||||
Sbjct: 504 atgtttgcatttg 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 718
Length adjustment: 9
Effective length of query: 310
Effective length of database: 709
Effective search space: 219790
Effective search space used: 219790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_p08.g1 MSMg01no164_p08.g1 CHROMAT_FILE:
MSMg01no164_p08.g1 PHD_FILE: MSMg01no164_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:57 2005
(516 letters)
>mm_chr4_96919179_96920095
Length = 917
Score = 553 bits (286), Expect = e-161
Identities = 310/318 (97%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 200 ggccccatgagcttctccccaagcatagtgctcatacccagtcttctgtatgcctgtgca 259
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 914 ggccccatgagcttctccccaagcatagtgctcatacccagtcttctgtaggcctgtgca 855
Query: 260 cgaaatggcagcttctgggagttcattactgcagtgggcatgtcactcccagcagacagc 319
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 854 cgaaatggcagcttctgggagttcattactgcagtgggcatgtcactcccagcagacaac 795
Query: 320 agttcatggctttcctcgcccccaccacgcgactcatacatttgttctgccttctctttc 379
|||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||
Sbjct: 794 agttcatggctttcctcgcccccatcatgtgactcatacatttgttctgccttctctttc 735
Query: 380 tcaattgtccctgtgccatttactgatgcctggctgaaagctgaacattcatctattccc 439
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tcaattgtccctgtgccatttgctgatgcctggctgaaagctgaacattcatctattccc 675
Query: 440 aggatctacttcctgtagctcacgggaagtgcatatgtaatatgg-cttgaagtgaggca 498
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 674 aggatctacttcctgtagctcacgggaagtgcagatgtaatatgggcttgaagtgaggca 615
Query: 499 ggaaaatttacttaggac 516
||||||||||||||||||
Sbjct: 614 ggaaaatttacttaggac 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 917
Length adjustment: 10
Effective length of query: 506
Effective length of database: 907
Effective search space: 458942
Effective search space used: 458942
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
