CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAAACTATCTTGCAGAAAAAAAGAAGGCATTTTCAAAAAATGGTG
CTGGTTGAATTGGTGGTAGACATGACGAAAAATGCAAATAGATCCATTCT
TATCTCCTTGTACAAAGCTCAAGTCCAAGTAGATCAAGGACTGCCACATA
AAACCAGATAAGCTAAATCAAATAGAAGAGAAAGTGGGAAAGAGTCTCAA
ACACATAGGCACATGGGAAATTTTCCTGAACAAAACACCAATTACTCAGA
CTCTAAAATCAACCATTGACCAATGGGACCTCATAAAATTGAAAAGTTTC
TGTAAGGGAAAAGGACACTGTCAATAGTTCAAGACAGAAGCCTACAGATT
GGGAAAAGATCTTTACCAACCCTACATCCAATACAGGGGTAATATCCAAA
ATGTACAAAGAAATACAAAATTGTTTTAAATAATATCAAATATAATAAAA
AAGAAACAGATAAACTCTTTCAATGACCAGAAAAAAAGCAGTTGTCTTAG
AATAAGAGAGACATAGTACCCCAATCAATGTTTCAAGTTCTGGTATATCT
GCATCCTGTCCAGGAATAGAGACATGTGAGGAAAATTTGGAGTGCTTGGT
AGAAAACTCCAAAAAAAAAAAAAAAAAAAAAAAAGCCCAGAGACTTATGA
CATCAGAATACTGN

GGGGGGGGGAGGNGNGANANNAAGAGCCCCCCCCCCCNCCCCCGGNCNNN
NCCCGAAGAAGTGGGTAGCCCGGNGGNCGCCGGGCTTTCCCGAAAAGNAN
GANNNANNGNNGGTTTACCCAAAAAAGAAGGGGNNNNNNNNNGNNNNNNN
NNGAGNNNNNNNGNAGNNNNGATGGCCCCCNNNNNGNNGANNNNNNGGNN
AAGNGGANNNNAGGGANANNNNNAAANAANNAAGGNNNNNNNNAAGAAAA
GGGGNGGANNNNNANAAANNNANAGNAGAGGNNNANAGANGAGAANAANA
NGNANANTTTTTTTTGANAATGGATNAGNNAAGTTAGAGNNTAAATGGAG
NNTTNAGGNNTAAANNNNGGGGGTTTGGTGTTTAGAAGGNANNNNGNAGG
NNGNNGAAANAGAATTGTTTTGACCCCCCCAGCCACAAAANCTTCAATCT
ACAAGACATGCTAGGGCAATTATGGCACAAAAATTATGGGAGTAGCCAAC
CAATATCTCATTGAACACAAACACACTACTATTTGGGTGAACAAGAACCT
GAACTACATAGCCCAAAACCTAAAGTAAAACTAGATACTACTGCTCAACA
AACAAAAAAACAGTATAATGGCTCCTAAAAATATCCTGGTATACTCATAG
ATGGGTGCCTTACTCAACCATAATTTGAGAAACTGAATACAGAGACTCTC
CGCCAGAAATTTTGTTTTTTATTTATGGGAAAAAAAAATTTTATTTACCT
GGTGAAGTC

Query= MSMg01no173_g22.b1 MSMg01no173_g22.b1 CHROMAT_FILE:
MSMg01no173_g22.b1 PHD_FILE: MSMg01no173_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:06 2005
         (594 letters)



>mm_chr4_23691962_23692955
          Length = 994

 Score = 1094 bits (566), Expect = 0.0
 Identities = 584/590 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaaactatcttgcagaaaaaaagaaggcattttcaaaaaatggtgctggttgaa 64
           |||||||||||||||  | ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaactatccagtagaaaaacagaaggcattttcaaaaaatggtgctggttgaa 264

                                                                       
Query: 65  ttggtggtagacatgacgaaaaatgcaaatagatccattcttatctccttgtacaaagct 124
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttggtggtagacatgaggaaaaatgcaaatagatccattcttatctccttgtacaaagct 324

                                                                       
Query: 125 caagtccaagtagatcaaggactgccacataaaaccagataagctaaatcaaatagaaga 184
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 325 caagtccaagtagatcaaggaccgccacataaaaccagataagctaaatcaaatagaaga 384

                                                                       
Query: 185 gaaagtgggaaagagtctcaaacacataggcacatgggaaattttcctgaacaaaacacc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaagtgggaaagagtctcaaacacataggcacatgggaaattttcctgaacaaaacacc 444

                                                                       
Query: 245 aattactcagactctaaaatcaaccattgaccaatgggacctcataaaattgaaaagttt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aattactcagactctaaaatcaaccattgaccaatgggacctcataaaattgaaaagttt 504

                                                                       
Query: 305 ctgtaagggaaaaggacactgtcaatagttcaagacagaagcctacagattgggaaaaga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgtaagggaaaaggacactgtcaatagttcaagacagaagcctacagattgggaaaaga 564

                                                                       
Query: 365 tctttaccaaccctacatccaatacaggggtaatatccaaaatgtacaaagaaatacaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctttaccaaccctacatccaatacaggggtaatatccaaaatgtacaaagaaatacaaa 624

                                                                       
Query: 425 attgttttaaataatatcaaatataataaaaaagaaacagataaactctttcaatgacca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 attgttttaaataatatcaaatataataaaaaagaaacagataaactctttcaatgacca 684

                                                                       
Query: 485 gaaaaaaagcagttgtcttagaataagagagacatagtaccccaatcaatgtttcaagtt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gaaaaaaagcagttgtcttagaataagagagacatagtaccccaatcaatgtttcaagtt 744

                                                             
Query: 545 ctggtatatctgcatcctgtccaggaatagagacatgtgaggaaaatttg 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctggtatatctgcatcctgtccaggaatagagacatgtgaggaaaatttg 794


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space:   574656
Effective search space used:   574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)