CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATGTTCATAGCAGCCTTATTTATAATAGACAGAAGCTGGGAAAAAA
AATCCGATGTCCCTCAACAGACCAATGGATACAGAAAGTGTGGTACATTT
ACACAATGGAGTACTACTCAGTTACTAAAAACAATGAATTTATGAAATTC
TTAGGCAAATGGATGGATCTGTAGGATATCATCCTAAATGAAGTAACCCA
GTCACAAAAGAACACACAAGATATGCACTCACTGATAAGTGGATATTAGC
CCAGAATCTCAGAATACCCAAGATACAATTTGCAAAACACATGAAACTCA
AGAATAAGGAATATCAAAGTGTGGATACTTCGTTCCTTCTTAGAATGGGG
ACCAAAATACTCATGGAAGGAGTTACAGAGACAAAGTTCGGGGCAGAGCC
TGAAGAAAGGACCATCCAGAGACTGCCCCACCTGGGGATCTATCCAATAA
ACAACCACCAAACCCAGACACTATTGTGTATGCCAACAAGATTTTGCTGA
AAGGACCCTGATATAGCTTTCTCATGTGAAGCTATGCCAGTGCCTGGCAA
ATACAGAAGTGGATTCTCACAGTCATCTATTGGATGAAATACAGGGTCCC
AAATGAAGGAGCTAGAGAAAGTAACCAATGAGCTGAACGGGTCTGCAACC
CTATAGAAGGATCAACAATATGAAC

CCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTAAATCCACTGAAAAAGTTC
TAGGTTACATTTGCGATGTTCATGCTACTATTGCATTGTGAGTATGTATT
CCTGAATCAGTCATTATTGTATCTCTTTAGGTTCATAGCTATGTAAGATT
AAGTATTACATTGCTCCTCTCCTACCCTGAATAACTCATTCCATAACTAT
GAAAACTCTCCAGTAGAGATGAAGTGTCTCAATCAATACAAGCTTGGTTT
ACCCAGATGTTCTGATTCATGTTTGTGGTGTCTTCAATATTAGGGTATTA
CCATCAAGTTCTAGAGTAATTAAGAGCATTGGAAATACCCGATAACATAA
TAATATAAACTCACTAATAGGCCATTTGATTGCAACTTTCTTTCCTAATT
GTAAATGAATGAAATAAATGCATATGCTCAAATTTTTCTATTAAAATAAA
ATAACTTCAAAACCTTTAATTAAACAATAAATTGAATAAAAGCCACAAAA
TTCCAGATTCATATATTTTTACCAAATAATTGAAAACTAATTAATTTATT
ATTATCCAATTAACATAAGCCCTTGGTTAACAAAATTACCACAATTACAT
TGCTGATCTTATGAAAACTGCAATTACTGGGAATATTTAATTAANATGTA
TACATGTATGCCATTCA

Query= MSMg01no175_m01.g1 MSMg01no175_m01.g1 CHROMAT_FILE:
MSMg01no175_m01.g1 PHD_FILE: MSMg01no175_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:54 2005
         (639 letters)



>mm_chr4_38208441_38209479
          Length = 1039

 Score = 1207 bits (624), Expect = 0.0
 Identities = 635/639 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttaaatccactgaaaaagttctaggttacatttgcgatgttcatgctactattgcattg 60
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 tttaaatccactgaaaaagttctaggttacatttgtgatgttcatgctactattgcattg 260

                                                                       
Query: 61  tgagtatgtattcctgaatcagtcattattgtatctctttaggttcatagctatgtaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagtatgtattcctgaatcagtcattattgtatctctttaggttcatagctatgtaaga 320

                                                                       
Query: 121 ttaagtattacattgctcctctcctaccctgaataactcattccataactatgaaaactc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaagtattacattgctcctctcctaccctgaataactcattccataactatgaaaactc 380

                                                                       
Query: 181 tccagtagagatgaagtgtctcaatcaatacaagcttggtttacccagatgttctgattc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccagtagagatgaagtgtctcaatcaatacaagcttggtttacccagatgttctgattc 440

                                                                       
Query: 241 atgtttgtggtgtcttcaatattagggtattaccatcaagttctagagtaattaagagca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtttgtggtgtcttcaatattagggtattaccatcaagttctagagtaattaagagca 500

                                                                       
Query: 301 ttggaaatacccgataacataataatataaactcactaataggccatttgattgcaactt 360
           ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 501 ttggaaatacccgataacataataatataaactcactgataggtcatttgattgcaactt 560

                                                                       
Query: 361 tctttcctaattgtaaatgaatgaaataaatgcatatgctcaaatttttctattaaaata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctttcctaattgtaaatgaatgaaataaatgcatatgctcaaatttttctattaaaata 620

                                                                       
Query: 421 aaataacttcaaaacctttaattaaacaataaattgaataaaagccacaaaattccagat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaataacttcaaaacctttaattaaacaataaattgaataaaagccacaaaattccagat 680

                                                                       
Query: 481 tcatatatttttaccaaataattgaaaactaattaatttattattatccaattaacataa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcatatatttttaccaaataattgaaaactaattaatttattattatccaattaacataa 740

                                                                       
Query: 541 gcccttggttaacaaaattaccacaattacattgctgatcttatgaaaactgcaattact 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcccttggttaacaaaattaccacaattacattgctgatcttatgaaaactgcaattact 800

                                                  
Query: 601 gggaatatttaattaanatgtatacatgtatgccattca 639
           |||||||||||||||| ||||||||||||||||||||||
Sbjct: 801 gggaatatttaattaaaatgtatacatgtatgccattca 839


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space:   647241
Effective search space used:   647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)