BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-176A08.T7 (MSMg01no176_a08.b1) | MSMg01-176A08.TJ (MSMg01no176_a08.g1) |
ACC | AG370842 | AG370843 |
length | 1,255 | 1,234 |
length of high quality (start - end) | 442 (90 - 531) | 712 (83 - 794) |
definition | CHROMAT_FILE: MSMg01no176_a08.b1 PHD_FILE: MSMg01no176_a08.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:47:15 2005 | CHROMAT_FILE: MSMg01no176_a08.g1 PHD_FILE: MSMg01no176_a08.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:47:15 2005 |
singlet/doublet | --- | singlet |
---|
BLAST hit | no hit data | unique |
---|
sequence | CCATTCTTTNNNNTACATTGGGCGCTAAGACTCCTAAGGGAGAGGATCCG
CGGAATTCACTTACAAAAAGGAATCCCCATTTATTCTGGCCTAGTGAGTT
TAGAGACATCGAAGACCCTTAGATCACAAATTGTTCTATAATTTTGTTGA
AAATACTTAGTGGCCCTTCAAGTTGAGAATCTTCATGCTCTTCTATACCT
GTTAACCTTGGGTTTGGTCTTCTCATTGTGTCCTGGATTTTCTGGATGTT
CTGGGTTAGGGGTCTTTTGCATTTTGCATTTTCTTTGACTGTTGTGGCAA
GGTTTTCTATGATATCATCTTCTATACCTGAAAGTCTCTCTTCTATCTCT
TGTATTCTGTTGGTGATGTTTACACCTATGACTACTGATCTCTTTCCTAG
ATTTTCTATTTCCAGGGTTGTCTCCCTTTGTGATATCTTTATTGTTTCTA
TTTCCATTTTTAGATCCTGGATGGTTTTGTTTAATTCCTTCACCTGTTTG
ATTGTGTTTTCCTGTAAATCTTGTAAGGGATTTTGTGTGTGTGTGTGTGT
GTGTGTGTTTATACCTCTTGTATTGCTCATTATCTCTTGTATCTCTTGAT
TCTTTTTTTTTCTATTTTCATTTCTTTCTCCTATTATTTATACCTTCTTT
GTTTTTTTCTCTCCTTACTAACTTACTATTCCTTTTTTCTATCTATTTAT
TATGTCTTTATTTCTTTCTTCTTATTTAATTTTTTACATTTACTTTTATC
TTCTTCTTTTTTCCTTTCTTTTACTTCTTATATTTTTTTTTTTTTTTTTT
CCTCCTTCTTTTTTATTCTTTCTCTTCTTTCTTCTTTTCTTTTTTTTCTC
TTCTATATCTTCACTTTTTATTTATTTTTATTTCTTTATTTCCTTTCTCG
TTTCTTCTTCCTCTTTTTTTTTTCTGCTTCTTATTTATTTTCTTCTTCTT
TTTGTTTCTTTTTTAATTATTTCTTTTCTTTTTCTATTTCTATCTTTTAA
TTTTTTTTTCTCTTTTTATCTACTTTTTTTTACTATTCTTCTTCTTTCTC
CTTTTCTTCTCCTCTAATTATCCTTTTTATTTTTATCTACTCTTTTTTCT
TTCCTATCTATTTTATTCTCCTCTTCTTTTATTGTTATTTCTTCTTCTTT
TTCTCTACCTCTCTTTCTGTATTCCTTCTTATTTCTTCTCTCTCCTTCTT
TTCTTTTCATTTATTACTCTTCATTTTCTCTTTCACTTTTTATTTTCTTT
ATATT
| TTTTTTAACAAGTGAGGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCCCTAAACCACTGTTTGTGAATCAACCATTT
TATCAACTGGCCTATATCCTCAGTCTCTTAACTTTTACAGTAGAAAATTA
TAACTGATTATAATGACATAAAATTATAAACAATAAATTTGTAGTATTTG
TATCATATTATATATAGTTTATATTGTGTGTCTTATATATAATATTTTGA
TTATATAGTTTAATGACTTATACTTGCATATCTCCTAAGTATACATTTTT
ACTTAAAATGTTTTTATTATAATTTCAAATATGCTCCCCAAATGTATTTT
TAGAAATAACCAATCTCACAGGATTTTTTTTCTAACGATGAAAACTTTTA
TGATTTTGTGTAAGGATATGGGAAACAAAAATGCTTTATATGTACCTTTT
AAATAATTTAATTAAGTAATAATATTATTCCTCATCTGTACTAAGCTAAG
ATTCTCCAGAAATCAAAACACTGGATAAGACTCAAGGCATAGCTGTATTC
TTGTTTGTGTGATTTTAGGAGTAAAGAGACCCTAAGTCTGCAAATATACT
TTCTGTTAACACCTACCTAAAAACACGTTTAAAAAGAAAGGTTTGGTTCT
TTGCCTGTTTTTTTCTTATTCTCCTATCAAGTCCATCTAGCTTGCTATGG
AGAGATTATATTTCTATTGGGACTACAATATAGACGATAGATCATTTGAG
TTATCCAGCCTTGTGGATTGAATGACTACCAGATTCTTAACCTTTCTATT
GAATAACAGACACTACTTGATTATCCAGATTGTAGCCTATAAGCCAACTA
AAATTTTTCATATGTATGTTATATTAATATATATAATCATATTATATATC
ATATATTAACATGTATCCTAAAATGCCTATATATTAATACATGTTAAACC
TTTATATTATGCCTAATTATAATATTACCATAATCTTAATATGGCCCCGC
CCCAAGGATAATTTCCCTCCCTGGAAAANAACTTTCTCTTTATAACTAAC
CCTCCCCCAAATGGAAATTGGATATTGGGTGGCGGTCGTTTTAAAAACCT
TTTCTTAACAACTTTAATCGCGGGGATTTTGAATTTTCTCCCTCCTGCGT
ATAATAAAAATCTCTTTTTTTCCCCCAATATGGTGTTCTCTGCATCTTTT
TCCTCACATTCTTCTCCTATAGTCTTTATATTTT
|
quality values | Open.Hide. 8 8 8 8 8 8 9 15 3 0 0 0 0 3 6 6 7 8 9 9 9 10 10 10 8 8 8 8 8 17 17 9 8 8 8 8 8 8 21 19 15 18 18 22 28 37 44 47 48 43
48 48 43 43 37 37 57 37 37 36 36 36 36 50 53 53 50 59 50 50 42 41 26 25 13 12 8 6 6 6 6 6 8 10 14 18 17 11 12 16 27 30 35 30 30 30 36 36 38 42
38 53 53 53 53 53 47 44 44 39 37 37 41 21 21 13 10 8 8 8 8 8 8 11 18 19 31 28 30 32 32 37 36 36 36 30 33 33 34 37 43 47 57 57 59 57 57 57 57 59
57 68 68 51 47 47 47 50 48 50 47 54 54 57 57 57 57 57 54 54 54 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 68 68 68 68 68
50 50 51 51 51 51 57 57 57 44 43 43 57 57 57 59 54 54 54 57 57 68 68 57 57 57 57 54 59 59 59 59 59 47 35 35 59 59 57 68 68 68 68 57 59 57 57 57 57 57
59 59 59 57 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 57 57 59 59 57 57 57 57 57 57 59 59 57 57 57 57 57 57 57 57 57 57 57 62 62 62 62 62 62 62
62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 68 68 62 68 68 68 68 68 68 68 62 62
62 62 62 62 62 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57
57 57 44 57 38 38 15 22 14 13 12 15 12 27 28 43 59 59 52 57 57 59 59 59 59 59 59 59 59 57 57 57 57 59 59 68 68 59 57 57 57 57 57 52 52 57 59 59 59 57
59 54 52 52 52 52 54 57 57 50 59 43 57 57 44 44 41 41 20 20 20 38 32 43 43 43 57 57 48 57 59 59 57 57 57 59 59 59 57 59 43 59 57 57 44 44 36 36 24 28
23 32 25 14 14 14 24 30 59 59 59 59 59 47 28 28 13 13 18 32 32 44 41 37 39 34 34 23 16 16 12 12 11 17 13 19 28 18 20 20 19 21 23 32 24 28 14 17 18 18
16 11 10 10 11 12 12 11 10 8 8 8 8 8 8 10 10 11 9 11 10 9 9 10 11 10 10 10 10 10 9 9 9 9 8 8 10 9 9 10 10 8 10 6 6 8 8 8 6 7
8 8 11 8 8 8 8 10 10 13 8 8 10 10 10 10 12 10 10 10 9 10 10 10 10 9 8 8 8 8 9 9 10 10 8 8 8 8 8 8 8 8 8 11 11 14 11 13 20 9
8 8 8 10 13 10 9 8 10 8 8 8 8 8 8 6 6 8 8 9 9 10 10 8 8 6 6 8 8 8 8 8 8 8 11 12 19 18 13 14 14 10 11 10 8 8 8 8 8 8
8 8 6 6 7 8 6 7 6 6 8 8 8 8 8 8 8 10 11 10 10 8 8 8 8 12 12 10 10 10 19 9 13 8 8 8 6 8 8 8 6 6 6 6 8 8 8 10 10 10
8 8 8 8 6 6 8 8 10 15 12 9 9 9 9 11 9 9 13 17 10 8 8 8 10 11 10 12 9 9 9 10 10 16 19 23 22 20 21 20 16 13 13 15 11 8 8 8 8 8
11 9 9 10 10 8 8 9 9 10 12 16 10 10 10 8 8 10 15 18 19 19 19 19 22 24 18 13 13 12 10 10 10 10 8 8 8 8 6 6 8 8 10 10 10 9 9 9 10 10
10 10 9 8 8 8 8 8 9 9 9 10 11 8 8 17 11 6 6 6 6 8 8 8 9 9 15 15 10 10 8 11 8 8 8 8 9 13 10 13 10 8 8 8 10 10 8 8 9 9
9 8 8 6 7 8 8 10 8 8 8 10 7 9 12 8 12 10 11 11 8 8 8 10 8 8 6 7 11 7 7 8 8 10 15 9 9 9 10 10 12 8 8 8 8 8 15 8 8 8
8 8 8 8 8 10 8 8 8 10 10 10 10 9 9 13 11 10 10 10 10 8 8 11 12 10 9 9 9 9 8 10 10 8 8 6 9 8 8 8 8 8 8 8 10 13 13 10 15 10
10 17 20 14 14 14 10 11 7 7 8 8 9 16 10 10 9 6 6 6 6 8 6 7 10 8 10 10 10 12 8 8 8 8 8 8 8 6 6 11 8 8 8 8 8 8 6 8 8 8
13 8 8 9 8 8 9 11 15 12 14 10 10 10 9 9 8 10 17 10 10 13 15 18 15 8 11 10 10 10 10 9 8 8 8 8 8 10 8 8 8 6 6 8 10 15 14 9 9 9
13 9 9 9 9 10 11 11 9 10 10 15 13 8 9 9 9 10 10 9 8 8 8 8 12 11 11 11 12 15 8 8 6 6 6 8 8 10 13 9 6 8 8 8 8 7 6 8 6 8
9 10 11 8 7 8 6 6 8 8 13 12 11 11 12 10 8 6 6 8 8 8 8 8 10 10 15 12 12 9 9 10 10 10 10 9 8 8 6 6 8 8 8 8 6 6 8 8 8 8
9 12 14 14 9 9 9 9 9 9 9 9 8 8 8 8 8 10 9 10 9 10 10 9 8 8 10 11 12 9 9 11 10 10 9 9 9 11 10 8 8 8 8 8 8 9 8 11 8 8
8 8 8 8 8 | Open.Hide. 7 7 7 7 6 6 6 6 6 6 6 6 6 6 6 6 6 8 9 9 15 9 9 9 15 8 8 9 8 15 10 18 19 19 19 12 16 16 32 27 36 30 32 35 38 36 38 37 37 37
37 35 35 35 38 53 53 53 50 50 50 50 47 41 33 27 9 9 9 7 8 8 8 8 8 8 10 8 8 8 8 10 15 26 30 36 36 36 50 53 53 57 57 57 53 57 57 57 36 36
41 41 37 37 37 29 23 17 10 10 10 15 16 20 27 37 33 33 43 37 37 28 28 29 33 35 34 34 34 34 43 43 57 47 47 53 53 47 47 68 68 68 68 57 59 59 68 68 68 53
53 50 54 54 59 59 68 68 68 68 57 57 57 57 57 57 50 50 50 50 50 50 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 68 68 68 68 57 57 57 57 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 57 57 59 59 59 59 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 57 57 57 57 57 68 68 68 68 59 57 57 57 57 57 57 68 68 68 68 68 57 68 68
68 68 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 59 68 68 68 68 68 59 59 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 50 50 48 48 46 47 59 59 30 25 11
11 11 12 12 13 13 30 30 59 59 59 59 59 57 57 57 57 57 57 50 50 59 50 50 50 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 47 47
43 43 59 59 59 68 59 59 59 57 57 54 47 47 41 41 39 43 59 59 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 54 52
50 50 50 57 57 59 57 68 68 57 57 57 52 52 43 59 59 59 59 68 57 59 57 57 57 57 57 57 57 57 57 57 68 59 59 59 59 59 59 59 45 45 45 57 57 57 57 57 59 59
59 59 57 57 59 59 59 68 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 57 57 57 57 57 57 57 57 57 52 52 52 57 59 59 59 59 59 59 59 59 59 59 59 59
59 59 57 59 57 57 57 57 57 57 59 50 57 57 54 54 50 59 59 57 57 57 57 57 57 54 54 54 59 57 68 57 57 57 57 57 57 59 57 54 54 54 57 57 57 57 57 43 57 57
57 57 57 57 59 57 48 48 48 48 54 54 57 59 59 54 54 57 57 57 48 48 48 59 59 57 57 48 48 48 57 59 59 59 59 59 59 59 48 48 47 39 39 39 39 39 32 32 37 37
41 32 31 17 14 15 15 17 18 39 39 46 46 42 47 44 41 28 20 19 20 25 27 30 34 28 28 34 34 37 32 32 20 20 28 41 37 43 41 41 41 47 43 42 42 50 38 36 47 30
30 22 28 30 30 24 20 20 24 27 37 37 28 28 22 22 34 32 32 41 39 39 39 40 41 37 39 28 22 16 15 12 12 23 16 24 24 27 25 28 12 12 9 9 9 14 18 19 11 11
14 19 19 13 8 8 8 13 15 18 21 12 13 21 26 37 43 28 28 23 23 15 15 12 17 12 11 11 19 23 34 28 26 20 20 11 12 17 17 10 10 10 11 11 11 12 10 10 15 18
13 9 10 12 22 19 8 8 8 8 8 9 9 15 15 10 12 10 15 13 24 13 14 9 8 10 8 9 19 14 18 21 33 32 30 18 16 10 10 10 15 19 33 24 23 20 17 12 8 9
11 18 13 14 14 23 19 9 9 12 11 12 9 10 10 10 10 11 21 19 31 30 28 19 12 10 10 10 10 15 16 15 16 13 19 9 10 9 10 8 11 11 12 14 8 8 8 8 8 8
8 10 10 10 13 10 10 8 8 7 7 7 6 11 11 12 10 10 9 9 10 10 9 9 9 10 9 11 10 16 15 11 8 8 8 19 15 9 9 10 13 13 11 8 8 8 8 8 8 8
8 12 12 10 10 9 9 9 11 11 18 16 10 13 13 10 10 10 11 21 18 15 7 6 6 6 6 3 0 3 12 13 11 12 10 10 10 11 12 8 8 8 6 7 6 8 8 8 8 8
8 8 8 8 10 19 19 25 21 19 13 12 12 12 21 22 11 11 10 10 10 6 6 6 6 8 8 8 8 8 8 8 8 8 6 6 6 8 8 11 8 11 11 21 15 11 8 6 6 6
8 8 12 12 12 12 12 12 8 8 6 6 8 8 12 10 10 8 8 6 6 6 10 9 9 10 10 8 9 8 8 8 8 12 20 10 8 6 6 8 8 9 9 9 10 10 8 8 8 8
8 8 8 8 9 9 14 14 14 15 12 13 13 10 10 13 22 17 11 9 7 8 8 8 8 8 9 8 8 7 6 8 8 8 8 10 19 17 9 10 9 12 12 9 9 9 9 10 9 8
8 8 8 8 8 8 8 8 10 10 10 8 8 6 6 10 10 10 8 8 8 8 9 10 8 10 10 8 8 6 7 12 10 7 |