Query= MSMg01no177_c10.b1 MSMg01no177_c10.b1 CHROMAT_FILE:
MSMg01no177_c10.b1 PHD_FILE: MSMg01no177_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:40 2005
(363 letters)
>mm_chr4_120854653_120855415
Length = 763
Score = 511 bits (264), Expect = e-149
Identities = 291/314 (92%), Gaps = 22/314 (7%)
Strand = Plus / Minus
Query: 5 gaattcttacttctagtgttgtatgtctttgtatttgctttaagttgtctcgaattgagt 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gaattcttacttttagtgttgtatgtctttgtatttgctttaagttgtctcgaattgagt 255
Query: 65 aatgattctcatatggagttcctgaaatgaagattaaattgatacagttcttttgttttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aatgattctcatatggagttcctgaaatgaagattaaattgatacagttcttttgttttg 195
Query: 125 t----------------------aaggtttctctatagcctggctgtcctggaactcact 162
| |||||||||||||||||||||||||||||||||||||
Sbjct: 194 ttttgttttttgtttttcgagacaaggtttctctatagcctggctgtcctggaactcact 135
Query: 163 ttgtagaccaggctggccttgaactcagaaatctgcctgcctctgcctcctgagtgctgg 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ttgtagaccaggctggccttgaactcagaaatctgcctgcctctgcctcctgagtgctgg 75
Query: 223 gattaaaggcgcacaccaccaccaccgcccggcgctagctaacattttattaagtatgac 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gattaaaggcgcacaccaccaccaccgcccggcgctagctaacattttattaagtatgac 15
Query: 283 tactgtgttcatat 296
||||||||||||||
Sbjct: 14 tactgtgttcatat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no177_c10.g1 MSMg01no177_c10.g1 CHROMAT_FILE:
MSMg01no177_c10.g1 PHD_FILE: MSMg01no177_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:40 2005
(277 letters)
>mm_chr4_120702944_120703621
Length = 678
Score = 456 bits (236), Expect = e-133
Identities = 270/290 (93%), Gaps = 16/290 (5%)
Strand = Plus / Plus
Query: 1 cagatgaaatgtattaggtttcactgggaagtcatggggagggccgttaatgtaaatcca 60
|||||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 192 cagatgaaatgtgttaggtttcactgggaagtcatgggggggg--gttaatgtgaatcca 249
Query: 61 cagcactaataacctaagcatcgccactggagtacaagcaagcatttccagaaggaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 cagcactaataacctaagcatcgccactggagtacaagcaagcatttccagaaggaagga 309
Query: 121 tggaggagggg-------------gaggactttatgtgaataaagggctactgagagcga 167
||| ||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 310 tgg-ggaggggtgggggggggggagaggactttacgtgaataaagggctactgagagcga 368
Query: 168 ggctacaaagacggtctccagcaaagtgtctctagggtgtcgatatctaggtcttcacag 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ggctacaaagacggtctccagcaaagtgtctctagggtgtcgatatctaggtcttcacag 428
Query: 228 tcccctttatgttccaatttctgtcttgttggatctgcaaccacccatga 277
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tcccctttatgttccaatttctgtcttgttggatctgcaaccacccatga 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 678
Length adjustment: 9
Effective length of query: 268
Effective length of database: 669
Effective search space: 179292
Effective search space used: 179292
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
