CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTGGTCTAGTTTGAGGCTTCTGGCTTCTGCTACAATATTTATAGTA
TCATTGGGACTTCTTTCTGATACTCTATTGTTGCCTGTGTGATGATGATT
CTGCTGCTTGGGATCTGTAAGACCTGCCTTTTCACACACCCCAGCAGTTC
ATAGATGGGGTAGATGTTGGGGTTGGGCCAAATCAAAGCCCTGGATCTGG
GCTTGAGATATATCTGAGTTGGACATCCTACTAGTTCTCCCATACCAACA
TCACCAAGGCAAATTCTCTTACCTTACCCTGGCTAGCCCATCATGTGCCT
CATCCATCAGGTGACAGAGCCAGGTTTCTTGCTCTCATGTCCTTGGGGCC
ACTTATCTGCAATCTTTGCAACCAGGGCCAGCTCTCCCATGCTACCTTGG
TGAAGTACTGTGCAGCTGGTGAGGGACAGAGCCAGTTCTCCCACTTTCAC
GATCCTGGTTCCATCTCTACGCCTACCATAGGTGGCAAGGGATGAGGGAG
GGAAGGAGGGCATCCCTTCTTCTTCCAAGCCACAACAGAACAGACTAGAG
GCAGGGCTTGCTTTCTGGTACTCGTGCCCTTGGGGCTCACTCACTGGGAA
CCCCCATGTCCAGGGCTCAACTCTACACTGGTTTGCAGGGCTGCTCTTTA
CTCCCCCAAGTGCTG

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACTGCATAGTGTGATGACAGAGACAAAC
TGTGGGCCTTAGGACACTGCCTGTGACATATCATTGGCATTCGGTTTCAG
GTCTTTGGAAAATGAGATGGTTTTGCTCTGTGTCCTCTCACTGCAGAGAA
GTGATAGAGTAAATGATGTGTTTAAGTGAATTATGGATCCTGAAGTAAAA
ATTGGGCTTACATATAAAAAATGAAGAAGCTATCTCAAGCGTGTACATTT
TGATAAATGTTAATTAGGTATCTTCATATTTAAGAATAAATTTAAAAGGG
AAAAACGGAGAAGGCAAATTTAGTGTATTGCATCATTAGCTGATAATGTT
ACCAGAGCTGTGGCATCCAACATATGGACTGATGCAATTAGCTAATTACT
AATTCAGATTTAGTACTGAGTGCTATTGTTTTGAACATCAATTTTAGCTT
AATAAGATGTTCTTCCTGTTTCATGATCTTCACAGAAATATAAGAATCCA
CAATTGGGTGATTTAAGCAAATGAGTGACTGAACTGTGGATGTGGGCCTT
TCCTTTTTTGTTGTTTTTTGTTTGTTTGTTTGTTTGTTTTTTGGTTGTTT
GNTTGNNNGNNNNNNNNNNNNNNTTNNTTTTTNNTTTTTTTTTTTTTNTT
TTTTTTTTTTN

Query= MSMg01no181_a04.g1 MSMg01no181_a04.g1 CHROMAT_FILE:
MSMg01no181_a04.g1 PHD_FILE: MSMg01no181_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:23 2005
         (569 letters)



>mm_chr4_70545407_70546375
          Length = 969

 Score = 1067 bits (552), Expect = 0.0
 Identities = 564/568 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   actgcatagtgtgatgacagagacaaactgtgggccttaggacactgcctgtgacatatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 actgcatagtgtgatgacagagacaaactgtgggccttaggacactgcctgtgacatatc 679

                                                                       
Query: 61  attggcattcggtttcaggtctttggaaaatgagatggttttgctctgtgtcctctcact 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 attggcattcggtctcaggtctttggaaaatgagatggttttgctctgtgtcctctcact 619

                                                                       
Query: 121 gcagagaagtgatagagtaaatgatgtgtttaagtgaattatggatcctgaagtaaaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gcagagaagtgatagagtaaatgatgtgtttaagtgaattatggatcctgaagtaaaaat 559

                                                                       
Query: 181 tgggcttacatataaaaaatgaagaagctatctcaagcgtgtacattttgataaatgtta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tgggcttacatataaaaaatgaagaagctatctcaagcgtgtacattttgataaatgtta 499

                                                                       
Query: 241 attaggtatcttcatatttaagaataaatttaaaagggaaaaacggagaaggcaaattta 300
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 498 attaggtatcttcatatttaagaataaatttaaaagggaaaaatggagaaggcaaattta 439

                                                                       
Query: 301 gtgtattgcatcattagctgataatgttaccagagctgtggcatccaacatatggactga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtgtattgcatcattagctgataatgttaccagagctgtggcatccaacatatggactga 379

                                                                       
Query: 361 tgcaattagctaattactaattcagatttagtactgagtgctattgttttgaacatcaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgcaattagctaattactaattcagatttagtactgagtgctattgttttgaacatcaat 319

                                                                       
Query: 421 tttagcttaataagatgttcttcctgtttcatgatcttcacagaaatataagaatccaca 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 318 tttagcttaataagatgttcttcctgtttcatgatcttcacagaaatataagaagccaca 259

                                                                       
Query: 481 attgggtgatttaagcaaatgagtgactgaactgtggatgtgggcctttccttttttgtt 540
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 258 attgggtgatttaagcaaatgagtgactgaaccgtggatgtgggcctttccttttttgtt 199

                                       
Query: 541 gttttttgtttgtttgtttgtttgtttt 568
           ||||||||||||||||||||||||||||
Sbjct: 198 gttttttgtttgtttgtttgtttgtttt 171


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space:   536081
Effective search space used:   536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)